Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | ILPSTFLLTLLLSVGLFFFIRASTKERTQTAQLISEQDEASLMPQLQEYFRSRSYRVAALDREQNQVTFEGFVQPSWFLAVFLTLLAAIGLLCLSLVLAILFPSFGTLFLGLILLSPLSGIFYWQKAGRLEKVSLKLETIPNQQHSSSTITVTGHRDELTELQKALQLK |
1 | 2v9jA | 0.11 | 0.05 | 0.47 | 0.72 | DisCoVER | | ------------------------------LGIRSQSRPNDIMAEVCRAIKQLDYEWKVVNP--YYLRVRRKN---------------------------------------------------PVTSTFSKMSLQLYQV---DSRTYLLDFRIFFECANLI-KIL-A- |
2 | 6vejA | 0.10 | 0.08 | 0.76 | 0.83 | DEthreader | | GFTLALLIIALGLLVDDAMITVEMASTPMTLVAVPGLVVPLMLFLMATFLMILQSVLFAAP-IILIGIISVVTDVATHHRTRPILLTAAAASLGMIPIAREVGPMAYAIGGIVAATLLTLIFLPALYVAW--------------------------------------- |
3 | 4i8oA1 | 0.10 | 0.05 | 0.49 | 0.56 | CEthreader | | -----------------------------RSYKNLNLVRANIETESRQFIENKNYSIQSIGPPGLRVVFTR--------------------------------------------------------PGVNLATVDIF-YNGDGSTTIQYLTGANRSLGQELADHLFET |
4 | 2ehbD | 0.11 | 0.07 | 0.60 | 0.73 | EigenThreader | | N--------AFEMITLSALFDRRQDFVKRQTRFVSRREPSEIIANIEAVANSM-GFKSHTR--NFKTRLEGLS------------------------------------------------------SGQLAVVIEIYEVAP---SLFMVDVRKAGLEYHKFYKKLCWR |
5 | 4k0eA | 0.15 | 0.09 | 0.64 | 0.29 | HHpred | | ----------------ETTITREMNKRHLTVRLNLRRDLSTFLEEARMRIDKE----VPYDRTHIQVAWGGQFENQQRAQARLAVILPMVLALMFVLLFGEFKNLRQPALILAVPLATLVALHLRGMT----------------------------------------- |
6 | 6s3kB | 0.09 | 0.08 | 0.86 | 0.43 | MRFsearch | | --LILVLAANTGFSAFPQLAFNLARDQYMPRMFTVFSNGIIFLGFASIVLII-------------TEHLIPLYAVGVFIPFTLSQTGMCALISFMVLSILFVTKFNVVWPVLIFMPIVVLLFFAIKNHIKGTVVIVPG------DQVIAVHVSFDREQEKKFEKRWE-- |
7 | 4yitA | 0.14 | 0.13 | 0.92 | 0.64 | FFAS-3D | | -INPWFLTGFIDGEG-CFRISVTKWRVQLFFQINLHEKDRALLESIKDYLKVG----KIHISGKNLVQYR--IQTFDELTILIKHLKRADFELFNTAHKLIKNNNKEGINKLVSLKALSGFASAE-----GCFMVGIAKSSASSTGYQTFILTQHVRDMKCLVDYFNWG |
8 | 5cw9A | 0.11 | 0.08 | 0.73 | 0.68 | SPARKS-K | | DIRFRGDDPEAYYKALREMIRQARKTVTVTLIIRFRGDDLEALEKALKEMIRQARKFVTYTLDGNDLEIRITGVP-------PQVILELVKEAIRLAKEF-------------------------NITVTVELVIRITGVP--------------EQVRKELAKEAERL |
9 | 5xtcr | 0.15 | 0.09 | 0.63 | 0.69 | CNFpred | | IAGSMVLAAVLLKLGGYGMMRLT----LILNPLTKHMAYPFLVLSLWGMIM---------------TSSICLRQTDLKSLIAYSSISHMALVVTAILIQTPWSFTGAVILMIAHGLTSSLLFCLAN------------------------------------------- |
10 | 5x5yG | 0.05 | 0.04 | 0.76 | 0.83 | DEthreader | | SYGIGDALRFIFLTAPRRAYDMLPMALILVGASNSELTIMRAAGVSLSRIVWAVM-----------------MLVMLAGILVGEYVAPWTENIAQSGRALAGGDSNAVQPVMEPEASIAFWTKVLQPLVAVMIIFPLR----------SVTLRIGV------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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