Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | ILNEAIPATTQHIDIQLQTSQEQAYRYTAILEKASENPLKMKDLEPFMIKEALFNLRQYEVFLNIILSDIITCAQEVEMMIKQLAAQMEQLKMTVQAKTAVPTSQVYPVFIALSGLWSSFQDETVLLSVLSNLTTHLGPFLGSHEELFSEQIIQNYLEEVEIKTDVFRIKESMGTRVNVGDFKKVDWLFPETTANFDKLPIQYRGFCGYTLAVTDGLLLPGNPTIGILKHKDRYYTFNSKEAAYAFADNPNKYIEMIGEKAKKSAELIQLLELHQQFE |
1 | 4e40A1 | 0.08 | 0.04 | 0.51 | 0.72 | DisCoVER | | SLLRPAVIRNFSRKKSEDILAKGGAAVERASAAVRVTAQKVRKAAA-VAHHALEHVKEEVEIVAKKVNEIIELTAGATEHAKGAKANG-----------------DATTFQSILTSLDNLDKDVKSVEQRAEELETALEKAERQLEKAEK-AAEEAETESSK-------------------------------------------------------------------------------------------------------------------- |
2 | 6tpiA | 0.07 | 0.05 | 0.68 | 0.83 | DEthreader | | ------------------------------------KQQQRAS-LLAQLKKQEEAISEATRKLRETQNTLNQLNKQIDEMNASIAKLEQQKAAQERSAALRTIAQLKQTREEVAMQRAELEEKQSEQQTLLYEQRAQQAKLTQALNER-KKTLAGLESSIQ--Q--ELRANESRRNIAEAKAEEARTAFVKAIA-D--G-R-V---ILADWL-----GLVVNQSALVSVG--SQVPIAYFE-IR--QG------------------------------ |
3 | 5xg2A | 0.07 | 0.05 | 0.75 | 0.49 | CEthreader | | AREEERNALVVRLGEIDRTFAVAREEFDTVVKELEEARKSLYEG-EARIKRAEEEKERLKAEILTGEARLPGLRERAENLRRLVEEKRAEISELERRLSSITRIKLSDLEKELELARKDLEKVLAEERAVREEIEVAKRRINELDTLIERGELAKLRGRIERLERKRDKLKK----------ALENPEARELTEKIRAVEKEIAALREELSRVEGKLEGL---------------------------------------------------------- |
4 | 4dylA | 0.07 | 0.06 | 0.86 | 0.97 | EigenThreader | | MQEAELRLLEGMRKWMAQRVKSDREYAGLLHHMSSQSWAEITSQTEGLSRLLRQHAEDLNSGPLSKLSLLIRERQELTKTHSQYRALARDSAQAKRKYDDKYVRSLWKLFAHHNRYVLGHQHHHQLMACILKEILQEYLEISSLVVAIHREMAAAAARIQPEAEYQGFLRQYGSAPD------------VPPCVTF---DESLLEPGEL-----------QLNELT------------VESVQHTLTSVTDELAVATEMVFRRQEMVTQLQQELRNEE |
5 | 5dfzD | 0.09 | 0.08 | 0.82 | 0.32 | HHpred | | ---DCCNILINRLKSEYDDAIKERDTYAQFLSKLESQNKEISEKQYSHNLSEKENLKKEEERLLDQLLRLEMTDDDLDGELVRLQEKKVQLENEK------------------LQKLSDQNLMDLNNIQFNKNLQSLKLQYEIFNATFKISTINGLLGSIESVVPWKEINAALGKNLKI-NLVDYELQPMGSFSKIKKRMVNSVEYN-------NST-TNA--PG-----DWLILVYYDDKSLETTLEIISE----ITRQLSTISYSE---------- |
6 | 5j1iA | 0.14 | 0.10 | 0.72 | 0.38 | MRFsearch | | --CAQRIAEQQKAQAEVEGLGKGVARLSAEAEKVLALSPAAPTLRLEQVRSLSAIYLEKLKTISLVIRGTQGAEEVLRAHEEQLKASLKKLRAQAEAQQDVEVERWRERVAQLLERWQAVLAQTDVQRELEQLGRQLRYYRESADPLGALQDARRRQEQIQ-AMDSQAVREQL-------------------------------------------------------------------RQEQALLEEIERHGEKVEECQRFAKQYINAI------- |
7 | 5oenB | 0.07 | 0.04 | 0.54 | 0.86 | FFAS-3D | | ---QGLHVDIEFLVRSIRQLKDEQDVFSFRYTVFSLKSDPHQSQQAQLVQATANKVDRMR---KEVLDISKGLVGRLTTLVDLLLPKLDEWKVQQAAPPELQLEQLEQWLTAGAKFLFHLRQLLKQLKEMSHFGQGVDLQNAQ-----VMELLQRLLQRS---------------------------------------------------------------------------------------------------------------------- |
8 | 4uosA | 0.10 | 0.06 | 0.59 | 0.67 | SPARKS-K | | MLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENGEDSEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLELKKAKEMAEKILKMVIELAEKILKKAMAEKILKKVKELGVG------------------------------------------------------------------------------------------------------------------- |
9 | 2nrjA | 0.11 | 0.10 | 0.90 | 0.76 | CNFpred | | -------ARMKETLQKAGLFAKSMNAYSYMLIKNPDVNFEGITILPGRIVQDQKNAAHAVTWDTKVKKQLLDTLNGIVEYDTTFDNYYETMVEAINTG---DGETLKEGITDLRGEIQQNQKYAQLIEELTKLRDSIGHDVRAFGS--NKELLQSILKNADVDADQKRLEEVLG---------SVNYYKQLE-------GFNVMKGAILGLPIIGGIIVGVA-EPLLAELRQTVDYKVTLNRVVGVAYSNINEMHKALDDAINALTYMSWHDLDSQYS |
10 | 5j65A | 0.05 | 0.04 | 0.66 | 0.83 | DEthreader | | KYGPGDMTNQFIISKEWATIGAYIQTGLGLPVQLHVNLIFSQLYDYCSDKTSAEWWNKLYPLIIKSANDIASYGFKVAGYFKKLQDELDNIV-DN--N--SDDDAIAKAIKDFKARCGILIKEAKQYEEAAKNIVTSLDQFLHGVINIQKRLKVQLNLVPLLGVYLQIKNID-------------------------------YST-------CPENNFM----------------IYWYNNS----------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|