Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | DLFLYNPTYQVWICTAPRCQYAVSPRTLLGHLRTRHRSHPTVATPALCQAVLTEMLQRPWADPSQGPCPQPSTGDPPVPGLPVYQGRGCPHCPYICRALAGLQDHRARKHK |
1 | 3hcsA1 | 0.06 | 0.05 | 0.73 | 0.77 | DisCoVER | | -QGYDVEFDPKYECPICLMALREAVQFCKACIIKSIRHKCPVDNEILLENQLF-PD-NFAKREI-LSLMVKCPNLHKMELR----------HLHQ---------------- |
2 | 4ouaB | 0.03 | 0.03 | 0.79 | 0.83 | DEthreader | | DTGF--------ALVLDLEDSEKMLEAVHDDIHGFVGMTAADPIFWLHHSNVDRHLSLINIRRGIKKQLFMFDWTI-----KENYIFIDLDTFD---HRYLKEK------- |
3 | 5t0uA | 0.11 | 0.11 | 1.00 | 0.59 | CEthreader | | RNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHT |
4 | 5ee0A | 0.07 | 0.06 | 0.96 | 0.58 | EigenThreader | | LKIGIVGLPNVINDIAAVDGIFHAFRLKDIEFVQNKIDDLEKSMKRSVKAHLEDDYQRKKNKFLPKIHAWVQEHGGETAAIHQTKAPQA----AGTIHTDFERGDLKELGS |
5 | 1zu1A | 0.14 | 0.12 | 0.82 | 0.41 | HHpred | | ----NSHIFSDTQCK--VCSAVLISSQKLAHYQSKHAN-----------KVRRYMAINQGEDS-VPAKKFKAAP--AEISDGEDRSKCCPVCNMTFSSPVVAESHYIGTHI |
6 | 5v3jE | 0.18 | 0.12 | 0.66 | 0.45 | MRFsearch | | ----------CFECK--ECGKAFRPSHLLRHQRIHTGEKKAFRYDTQLSLHLLTHA--------------------------GARRFECKDCDKVYSCASQLALHQMSHTG |
7 | 1zu1A | 0.13 | 0.10 | 0.76 | 0.70 | FFAS-3D | | -------------CKVCSAVL-ISESQKLAHYQSRKH------ANKVRRYMAINQGEDSVPAKKFKAAPAEISDGED-------RSKCCPVCNMTFSSPVVAESHYIKTHI |
8 | 5v3jE1 | 0.18 | 0.14 | 0.80 | 0.83 | SPARKS-K | | ------------PHKCKECGKAFTPSQLSHHQKLHVGEKPYKPSNAQLSLHHRVHTDEKCFECKECGKAFMRTGEKP---------HKCKECGKAFRYDTQLSLHLLT-HA |
9 | 2ghfA | 0.16 | 0.08 | 0.51 | 0.62 | CNFpred | | ----------GYECK--YCTFQTPLNMFTFHVDSEHPNVVL------------------------------------------NSSYVCVECNFLTKRYDALSEHNLKYHP |
10 | 2hgsA | 0.02 | 0.02 | 0.95 | 0.83 | DEthreader | | AYQFNLDAVSGNRSDYLKQIEINTISA--SFGGLASRTPASNNPSKGLALGIAKAWL-A-CPDIATQLATVQQELRMLVLRTFAGLYSLDVGEGAI-EAPVLMVALKQLDS |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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