Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260 280
| | | | | | | | | | | | | | |
| Seq | REALARLGLHALVRFDSVAPPEDGERRLYESLALLLENARPQLERLIADQQAQRQARQQSAARLIAELLIDCASCRRSVVSEAEQEQQAINELRKAVRQREQRCVEALLKLYAFRPQDAAASDLPLLDGRWGDDLFNPETLKQLGVRVGGGIAAGAAAGAGVDLLVGGLTLGAAALAGAIAGGALQTARSYGSRLMGKIKGQRELTVDDSVLRLLALRQRQLLHALNARGHAAMDSIQVATPQDKSWREGKLPEPLNKARAHPQWSSLNPYPKLSQAERQEQIEALA |
1 | 5im2A | 0.08 | 0.06 | 0.75 | 0.61 | DisCoVER | | HTFMAPQSNVWQNMWMVSES--GGR--IQFEA-YPAMQ-------LGGSPAQLYDQAK-DGDIIWTIPGPRIEVFELPFMM-----------TN--AEATSRACWEYF--DT-----QV-LA-LQVH------GPG----V--FH-TKDKGLKMRG-PTRQVTKMLGYLGAIPVGMPLTI-DGAALTR-FHS--EF-DPAGGALY-T---A---T--FV-LAM-NKASYLRIIDNNSGLTSGWLGRVQQAGD---AVVEVAWVEDMNQRFDGRL----LTTARALI- |
2 | 4a01A | 0.05 | 0.03 | 0.58 | 0.67 | DEthreader | | -IFMVAFAILIF-F---V--QACS-YD---------------TCKPALATAIFSTVSFLLGGVTSLVSGFLGMKIYARTTAGVGKAFITAFRSGAVMGFLLAANGLLVLYIAIN-------------------------------------SMALFGR--------------------V--GGGIYTKAADVADLGED-----NVGDNVDIAGMGSDLFGSYAESSCAALVVMYGAVAAMFAIGSAASTMVSTD--------------------------------- |
3 | 6ek4A | 0.13 | 0.13 | 0.94 | 0.39 | CEthreader | | AARASVPQLQTVLRQLPPQDYFLTLTEIDTELRNTLLEARSEHIRNLKKDVKGVIRSLRKEANLMASRIADVSNVVILERLAEIQADIAQQEKNKAKLVVDRNKIIESQDVIRYNLADMFKDYIPNISDLDKLDLANPKKELIKQAIKQGVEIAKKILGNGLKYIELADARAKLDERINQINKDCDDLKIQLKGVEQRIAGIEDVHQIDKERTTLLLQAAKLEQAWNIFAKQLQNTIDGK------------------IDQQDLTKIIHKQLDFLDDLALQYHSMLL |
4 | 4wbdA | 0.08 | 0.07 | 0.85 | 0.75 | EigenThreader | | AKQQEKELQVPKKKLPQTSLDQEKCAAWIDDVFAAFETLLDNVKRCLREGIKKLETAMFQKILRENDELARAVS-------DQQAFMRQAGEINYWGEQAFAVMIEKKLAERNISLQDAIERGTENQRETYFERQIPEEFTAVMDQAKSQIEAIHKTVRQEALK---VDQSLEPLLLKNAAFIQDQLQFLERTVMKRIEEKE---------------------GYVLKDYERIQNSIKPLLAPQERIWNIMYYLNRYGPKFFTTFKNLPFSFQNQ-----------H |
5 | 2pffB | 0.11 | 0.10 | 0.89 | 0.51 | HHpred | | -KFLGYVEPSKVGQFDQV------LNLCLTEFENCYLEG-NDIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSDELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTLNIL--EWLENP-SNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLQGLVTAV-----AIASWESFFVSVLFIGVRCYEAYPNLPPSILEDEQVQDYVNKTNSHLPAGKQVEISLVNGAVVSGPPQSLNLTLRKAKSGLDQSRIPFSE--------------- |
6 | 2w6dA2 | 0.09 | 0.07 | 0.81 | 0.53 | MRFsearch | | ----------------ELKKRIDSVEPEFNKLTGIRDEFQKEIINTRDTQARTISESFRSYVLNLGNTFENDFLRAALQKAFEQYITDKSAAWTLTAEKDINAAFKELSRSAITDQITEKLTGKDVED--------NSPGWAKWAMGLAGFALAGAGFDWKNILLNYFTVIGIGGIITAVTGILLLGVGFLQADQARRE---LVKTAKKELVKHLPQVAHEQSQVVYNA------------------VKECFDSYEREVSKR---------INDDIVSRKSELDNLV |
7 | 6xz4A | 0.11 | 0.09 | 0.85 | 0.76 | FFAS-3D | | -QLVADLLLRPVLFEGPASSGAESFEQCRDTIIARTKGLSILTHDVQSQLNMGRFGEAGDSLVELGDLVVSLTECAQPGLVDRYRVTRCRHEVEQLLLEVSQGLSRNLKFLTDACALASDKSR-------------DRFSREQFKLGVKCMSTSASALLACVREVKVAPSELARSRCALFSGPLVQAVSALVGFATEPQFLGRAAAVSAEGKAVILGGAMSVVSACV--------------------------LLTQCLRD----LAQHPDGGAKMSDHRERLRNSA |
8 | 5k7vA | 0.13 | 0.10 | 0.82 | 0.76 | SPARKS-K | | -----------------------IEEVVAEMIDILAESSKKSIEELARAAEKAVAEAIEEIARLATAAIQLIEALAKNLAS-----EEFMARAISAIAELAKKAIEAIYRLAD----------------NHTTDTFMARAIAAIANLAVTAILAIAALAISAIAELAKKAIEAIYRLAAAIEAIALLATLAILAIALLASNHTTEEFMAKAISAIAELAKKAIEAIYRLAD--------NHTSPTYIEKEAIEKIARKAIKAEMLAKNITTEEYKREKAKEAIKRLE |
9 | 4f4cA | 0.09 | 0.07 | 0.75 | 0.73 | CNFpred | | NNRLRREFVKSILRQEISWFDTNLATKLFDNLERVKEGTGDKIGMAFQYLFITGFIVAFTHSWQLTLVMLAVTPIQALGFAIAKSMSTFAIRETLRYAKVVEETISSIRTVVSLN--------------------GLRYELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVH---------------GSLNFGDMLTTFSSVMMGSMALGLAGPQ--------------------LAVLGTAQG----------------AASGIYEVLD |
10 | 5uot0 | 0.04 | 0.02 | 0.60 | 0.67 | DEthreader | | ISQEADK-FFLIEKIKMFNQDIEKLV-------------------EVVR-ENETR-LYNKIREDFKNWVGILATTQVKIHVKYKTFEIIVHQYIQQLVEPALSMLQKAMEIIQEKVKHTAKAENMIQ--LQFRME-QMVF-C---QDQIY-----------------------------------SVVLKKVREEISFTEIGIHLNFLETSKRLANQIPFIIQYFMLRNGDSLQKA--------------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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