Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | ILAFEVANTIVKGANLMQSLSKESVSYLKEMVLPSEGVRRLISDDISELLRIAAADK |
1 | 2jafA | 0.08 | 0.07 | 0.93 | 1.00 | DEthreader | | PIWGATLMIPLVSISSYLGLSGLTVG--MIEAAARYS-YP-IVGTSWAYSVLDVFAV |
2 | 3hy6A | 0.04 | 0.04 | 0.89 | 1.00 | DEthreader | | AVSSAKRSLRGELKQRLRAMSAEERLRQSRVLSVIHY--IS-IFLSM-DEPG--LGQ |
3 | 5yf0A1 | 0.10 | 0.02 | 0.18 | 0.52 | DisCoVER | | ---------------------------------------QFRSLPANQQ-------- |
4 | 2yqyA | 0.13 | 0.12 | 0.95 | 1.00 | DEthreader | | TWDEALKRLEASRKALLALLEAD-PAWLSAPAWT--MVAEHALLEVALLDRARAFLL |
5 | 2lt3A | 0.09 | 0.09 | 0.98 | 0.54 | CEthreader | | VDSTTWNRRYREYMEKIKTGSVFEIAEVLR-DLYLLKGDKDLSFGERKMLDTARSLL |
6 | 2a3nA1 | 0.05 | 0.05 | 1.00 | 0.57 | EigenThreader | | FNQDEYLTSAREIIAAEQVADEIYQAGITLSSGDTKESVAIAEWCKAQLAQARHKNG |
7 | 1lshA | 0.09 | 0.07 | 0.82 | 0.29 | HHpred | | -VHEDAPAKFLRLTAFLRNVDAGVLQSIWHKLHQQKDYRRW-------ILDAVPA-- |
8 | 1lshA | 0.13 | 0.12 | 0.95 | 0.35 | MRFsearch | | --HEDAPAKFLRLTAFLRNVDAGVLQSIWHKLHQQKDYRRWISEALLFLKRTLASE- |
9 | 6rnqA2 | 0.12 | 0.12 | 1.00 | 0.39 | FFAS-3D | | LTDNLVAMAPAAGYHVWLWAVEAFAKQLCFQDQYVKAASHLLSHKVYEAVELLKSNH |
10 | 5cwfA2 | 0.18 | 0.18 | 0.96 | 0.77 | SPARKS-K | | --SDEMAKVMLALAKAVLLAAKREIARAAAEIVNSELAKRVLNNDDETAREIARQAA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|