Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | MYENLKSLGIQDPASVDSYTLRQEANHDILKIYFKKQKGEFFAKSVKFKYPRQRKTMLVDSGTHEYKDVTEINANLKYVVDELDNLTQGVHQQADPDIKQKILRDLRHLEKVVQNKISEIERDLEKL |
1 | 2zdiC | 0.10 | 0.06 | 0.56 | 0.71 | DisCoVER | | LNLAKAEV----------QVRETLENLKEKPEILVPIGAGSFLKGVIVDKNNAIVSV-----GSGYAVERSIISLEKRLKEYDEAI----------------------------------------- |
2 | 3hd6A | 0.09 | 0.07 | 0.77 | 0.83 | DEthreader | | SDVVMVGFGALINAFC--S--------GA----------VTLFAFGAGL-NS-ISLHK-------KGKLDMVHIQNATLAGGVAVGTAAEMMTAAAQGKFQIYGLLVTLAMALMGGIIVGLILRLPF |
3 | 6n2gA | 0.05 | 0.05 | 1.00 | 0.56 | CEthreader | | ILSYLTDVTTAASKDPAGFKIEFHNQVLTKTYLLGFDPDFDGPHVIRAVGKAVKKKQKKGANAGKFLTKTVKADSFFNFFEPPKSKDDEDDEQAEEFLELDYEMGQAIRDTIIPRAVLFYTGELQSD |
4 | 6h3gA | 0.05 | 0.05 | 1.00 | 0.68 | EigenThreader | | ESITWEVSPARLSSNAIDAGFKIRPTVMFGSIVAGAYADHTLLPMFQYLEYPAGKIHIKSQNPYVEPFFDSGFMKTREVARRETAKQIYPDGDIPYTEEDDKAIDDWVADHVETTYSSALLVGEKGA |
5 | 5uz9A | 0.10 | 0.09 | 0.85 | 0.33 | HHpred | | EYPNLAIQKFTKPQNISQLNNERRGENWLL--------PSLPPNRQNVNAPMRHSSVFEHD--------FGRTPEVSRLTRTLQRFLAKT-VHNNLAIRQRRAQLVAQICDEALQYAARLRE-LEP- |
6 | 1fioA1 | 0.08 | 0.04 | 0.48 | 0.30 | MRFsearch | | ------------------------------------------------------------------NKISQINRDYDHTINQVDSLHKRLLTEVNEEQASHLRHSLDNFVAQATDLQFKLKNEIKSA |
7 | 1u00A | 0.13 | 0.12 | 0.88 | 0.51 | FFAS-3D | | ---------------LARFALRLPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYGKARMLAEQKVEAARVLESLHGALAADAALLSAAERQVIDDAAAHLSEVIEQAIKNVDKQTQDF |
8 | 3b2aA3 | 0.09 | 0.06 | 0.59 | 0.68 | SPARKS-K | | ----------------------------------------------------DSGHLTLILDEIPSLLQNDNEFIVELALDVLEKALSFPLLENVKIELLKISRIVDGLVYIIRLKAKKVSDLIDSV |
9 | 1fioA | 0.06 | 0.02 | 0.42 | 0.47 | CNFpred | | --------------------------------------------------------------------------KYDHTINQVDSLHKRLLTEVNEEQASHLRHSLDNFVAQATDLQFKLKNEIKSA |
10 | 6ww2R | 0.02 | 0.02 | 0.82 | 1.00 | DEthreader | | ----------------PILCYVGTIFLYFMAIWITLAIAGYQYFHAWISKSASVDGDPV-------GICYVGSRGFVGPLVLYLLVGTLFLLAGFVSLFRARRQLADLEDNWETLNDNLKVIEKDQA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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