Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | KCEACKILATELQARLSETGKSHDVIELGYSVDDVKPKKRTEYRRSELRLLESMENVCDRILEYNIHKERKDSTRFAKGMSQTFQTLHGLVNKGVKVDLGIPYELWDKPSAEITQMKTQCETMVENFEDVIEKWYFNKQEEIPLIKYLCEDRVLRANDHQ |
1 | 3bqpA | 0.11 | 0.06 | 0.49 | 0.62 | DisCoVER | | DGGFCEVCKKLVGYLDRNL--------------------EKNS--TKQEILAALEKGCSFL---------------------------------------------------PDPYQKQCDQFVAEYEPVLIEILVEV--MD-PSFVCLKIGA--CP--- |
2 | 4qvrA | 0.06 | 0.05 | 0.79 | 0.83 | DEthreader | | -QLFEKALIKAQAEYISFISAN------QLKEGLNPKALLQTIKSLTTGFGN-LSGL-LP--IKT-FVVEK---A-IGVV----------L-KDKSDVGF--LA-YGQGAAIARAN-LVTLIAGQSEALT-SEDISSRIDATDIEKTLS-TYYKTK-ANL |
3 | 3bqpA | 0.21 | 0.10 | 0.48 | 0.77 | CEthreader | | FCEVCKKLVGYLDRNLEK-------------------------NSTKQEILAALEKGCSFLP---------------------------------------------------DPYQKQCDQFVAEYEPVLIEILVEVMD----PSFVCLKIGACPS--- |
4 | 2wwbA | 0.08 | 0.07 | 0.89 | 0.73 | EigenThreader | | SNIPIILQSALVSNLLSARFSGNLWSDTSSGGPARAYPVGGEDPVHAVVYIVFMLGSCAFFSKTWIE---------VSGSSAKDVAKQLKEQQMVMRTSMVHELNRYIPTAAAFGGLCIGALS---------VLADFLGAIGSGTGILLAVTIIYQYFEI |
5 | 5w78A | 0.19 | 0.09 | 0.49 | 0.51 | HHpred | | TCVGCVLVVSVIEQLAQVHN-S-----------------------T---VQASMERLCSYLPE----------------------------------------K---------LFLKTTCYLVIDKFGSDIIKLLSADM---N-ADVVCHTL-EFCKQNT |
6 | 3s64A | 0.14 | 0.06 | 0.46 | 0.45 | MRFsearch | | -CEICKMAVKLIVPEADKD---------------------------LDQLEKEFIQGCMTLIG------------------------------------------------WLPYAEKECKALAKIEMGAIKTLLENG----SAPEEICTTLH------- |
7 | 1l9lA | 0.12 | 0.05 | 0.43 | 0.68 | FFAS-3D | | -YRTCLTIVQKLKKMVDKP--------------------------TQRSVSNAATRVCRT---------------------------------------------------GRSRWRDVCRNFMRRYQSRVIQGLVAGET----AQQICED--------- |
8 | 4uosA | 0.08 | 0.08 | 0.99 | 0.64 | SPARKS-K | | VKKMLEKMIEEIKKMLEKAIKKKEMLEKMIKEIKKMLENGEDSEKILKKAKEMAEKILKMVIELAVKELGVDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLEKILKKAKEMAEKILKMVIELAEKILKKAEMAEKILKKVKELGVG-- |
9 | 5cwoA | 0.09 | 0.07 | 0.76 | 0.58 | CNFpred | | VARAAKVAAEVIKVAIQAEKE-----------------GNRDLFRAALELVRAVIEAIEEAVKQG-------NPELVEWVARAAKVAAEVIKVAIQAEK------------GNRDLFRAALELVRAVIEAIEEAVKQG--NPELVERVARLAKKAAELIK |
10 | 5fsaA | 0.04 | 0.03 | 0.82 | 0.83 | DEthreader | | TTF-YVKIREEILNYFVTDKLKEKT----------------HG--V-ANVMKTQPEITIFTASRSLF--------GDEMRITYMKEKLRRERGDILISTKMTDQEIANLIGILMGGQHTSASTSAWFLHLGEPQDIYQVGGDDLTYEDLQLVNNAAAKAV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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