Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | ADMKLMMVALGEGTQNYTCGANLTAPPSAIGAVATLFDASCDLVNSPPISTQQLGSIEEDAKSIGAHFFVDNTTPDFDILGLGNTRAKKTEECAAPNPTGDVKWLRLTAQADGSTSAVKEIYRLNTVGGLAPKSCEGKAVGDIVTVEYQAQYWIY |
1 | 7bv0A | 0.07 | 0.06 | 0.78 | 0.81 | DisCoVER | | PITNWRSGDVVWVTLPSAEYAQSHPAYWSEEATIINVAT-----------------------GQRAAVSDQVTLLHKETHSGLVYYQLPLGKINFWQQKAGYTYNDSLWVWWDGGSKAYLYIS--TYTTML---G----AG-PVNITGLGAVGP- |
2 | 5lalA | 0.07 | 0.05 | 0.73 | 1.00 | DEthreader | | QKKPKHFSFYFHDILAAVSPPGLGKFGKFVIFDGPITM---DKN-----------------KPVARAQGFY-FSYTLVFNHKGTLNIMG-ADLMM-----E-PTRDLSVVGGTDFMARGIATFVTDLFQGA--------------KYFRVKMDIK |
3 | 1lnzA1 | 0.09 | 0.08 | 0.92 | 0.79 | CEthreader | | DQVKVYVKGGDGGNGVAFRREKVPKGGPAGGDGGKGGDVVFEVDEGLRTLDFRYKK--HFKAIRGEHGSKNQHGRNADDVIKVPPGTVVTDDDTKQ-----------VIADLTEHGQRAVIARGGRGGRGNSRFATPANPAPQLSENGEPGKERY |
4 | 5k21A | 0.06 | 0.04 | 0.70 | 0.75 | EigenThreader | | ----VTMTLDVKNDVAKHDGKPGMDVGDMDIFSDILSVDG--------------------KQVGYDGGACDNCELTIHLD---AGEIFARSLTPHT---LAPFTMAITGGTGEYA--NSKGELTVSGVAT---------PD------EKYELKLT |
5 | 3ho4B3 | 0.08 | 0.06 | 0.85 | 0.23 | HHpred | | --NCFCIQEVVSGLRQPVGALSGQRLFILEGYV-KILTPEGEIFFVYRGCQ--SERLY------GSYVFGDRNGNFLTLSPTKQWQEKPLCTSGSCRGYFSGHIVYILSSSKSTQTHNGKLYKIVDPKRPLPEECRATV-QPA------------ |
6 | 1isyA | 0.11 | 0.07 | 0.66 | 0.60 | MRFsearch | | ----------GTQVQLYDCHSATNQQWTYTDGELRVYGDKCLDAA-----------GTGNGTKVQIYSCWGGDNQKWRLNSDGSIVGVQ-------------SGLCLDAVGGGTANGTLIQLYSCSN-----------GSNQRWTRT-------- |
7 | 3ho4B3 | 0.08 | 0.07 | 0.89 | 0.49 | FFAS-3D | | --NCFCIQEVVSGLRGALHSGDGSQRLFILGYVKILTPEGEIFKEPYLDIHKLVFVYRQSERLYGSYVFGDRNGNFLTLQTKQWQEKPLCLGTSGEDELGE---VYILSSSKSTQTHNGKLYKIVDPKRPLPEECRATVQPAQ------------ |
8 | 5n8pA5 | 0.12 | 0.11 | 0.88 | 0.67 | SPARKS-K | | SGAAQTVTAGAGQNLTATTAAQAANNVAVDGGANVTVASTGVTSGTTTVGANSAASGT---VSVSVANSSTTTTGAIAVTGGTAVTVAQTAGNA---VNTTLTQADVTVTGNSSTTAVTVTQ---------TAAATAGATVAGRVNGAVTIT--- |
9 | 3ty1A | 0.06 | 0.05 | 0.88 | 0.99 | CNFpred | | --------DYQIIYHSNFGTPILEEGARFLAPISSISPFNDYAKSGLKTWQTYQGPTKDFDEMVFNIQPLADHQTLAAVVNDKGASIQFDTR--------QLPVLTLWKNTDT--GYVTGIEPGTSYAYPVTIEVKQLQPGASAQFDLTYTLLHD |
10 | 5btuA | 0.07 | 0.05 | 0.71 | 0.83 | DEthreader | | AVALIVLDLTEFAELVVHDR---PGGITTVEYVEVYEDA-SG------------------V-RLGTATGNAVHQSVSEL-ADGSFEAVG-VIDCTALR----RTQVLRVTGRSGRYKSGF-TLAISDPNQ---------------RPPHYSVQVV |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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