>PF11933 (214 residues) KQKEQSGGEEKDDDEFHKSESEDSIRRKGFRFSIEGNRLTYEKRYSSPHQSLLSIRGSLF SPRRNSRTSLFSFRGRAKDVGSENDFADDEHSTFEDNESRRDSLFVPRRHGERRNSNLSQ TSRSSRMLAVLPANGKMHSAVDCNGVVSLVGGPSVPTSPVGQLLPEVIIDKPATDDNGTT TETEMRKRRSSSFHVSMDFLEDPSQRQRAMSIAS |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | KQKEQSGGEEKDDDEFHKSESEDSIRRKGFRFSIEGNRLTYEKRYSSPHQSLLSIRGSLFSPRRNSRTSLFSFRGRAKDVGSENDFADDEHSTFEDNESRRDSLFVPRRHGERRNSNLSQTSRSSRMLAVLPANGKMHSAVDCNGVVSLVGGPSVPTSPVGQLLPEVIIDKPATDDNGTTTETEMRKRRSSSFHVSMDFLEDPSQRQRAMSIAS | |||||||||||||||||||
1 | 5a4gA | 0.06 | 0.03 | 0.57 | 0.61 | DisCoVER | --------------NG--PH--------GHDPAA-G-AELK---TGKRILYWRKPGKIPVYEEGRVTQVRTAEVK----------------LGRLGSTERLLVPSEALIR-RTIAMVAKGEGGFDPVEVKAGATGQSEILEGLKA-------------------GQQVV--V--------------------SGQFLIDSEASLRGTVA----- | |||||||||||||
2 | 5zm5A | 0.04 | 0.04 | 1.00 | 0.51 | CEthreader | QWERTGKPFNPLLGETYELVRDDLGFRLISEQVSHHPPISAFHAEGLNNDFIFHGSIYPKLKEAEPKGTITLELLEHNEAYTWTNPTCVHNIIVGKNVEIINHKTGDKCVLNFKPGLFGKELHKVEGYIQDKSKKKLALYGKWTELYSVDPATFDAYKKNEMPVPDSESVFIIPGSVLLWRIAPRPPNSAQMYNFTSFAMVLNEVDKDMESVIP | |||||||||||||
3 | 4zlhA | 0.06 | 0.06 | 0.88 | 0.57 | EigenThreader | AIRIHQTLMEQLGRDYMAAGLYDRAEDMFNQLTDFRIGALQQLLQISEWQKAIDVAERLVKLGKDKQRVEI------AHFYCELALQHMASDDLDRAMTLLKKGAAADK--------------------NSARVSIMMGRVFMAKGAVESLQRLEMLQTCYQQLGKNTGEARDGSEAAQVYITRQLQRHPTMRVFHKLMDYHLNEAMVLRDMVG | |||||||||||||
4 | 4bl8A2 | 0.13 | 0.06 | 0.48 | 0.23 | HHpred | --------------DLIRTRQLESV---HLKFNQES-------------GALIPLC----LRGRLLHGRHFTYKSITGD-----------MAITFVSTGVEGAFATE---------EHPYAAHGPWLQILLTEVEKMLEDLEDE-----------FKLPKEYSWPEK----------------------------------------------- | |||||||||||||
5 | 2pffB | 0.26 | 0.05 | 0.18 | 0.87 | MRFsearch | ---------------------------------------------------------------------VLTHRN-----------------------------------------------------------------KDGTGVRVIVAGT------------------------------------------GMDLYKTSKAAQDVWNRAD | |||||||||||||
6 | 6nyyA | 0.17 | 0.16 | 0.93 | 0.37 | FFAS-3D | --KDVAGCEEAKLEKNPKQYQDLGAKKGAILTGPPGTGKTLLAKAGEANVPFITVSGSEFLEMFVGVGP-----ARVRDLFALARFIDQIDAVQSEQENTLNQLLVEMDGFNTTTNVVAGTNRPDILDPALLRPGRFDRQIDIKGRASIFKVHLRPLKLDSTLEKDKLARKLAADVANVCNEAALIAARHLSDSINQKHFEQAIER-------- | |||||||||||||
7 | 3l6wA2 | 0.07 | 0.07 | 0.96 | 1.04 | SPARKS-K | EELEEVLRSLRLKSRVFAGFVLSGIRTTKVYIKSGTDSDDEYAGSFVILGGAKEMPWAERLYRFDITETVHNLNLTDDHVKFRFDLKKYDHTELDASVLPAPIIVRPNNAVFDIIEIPIGKDVNLPPKVVVKRGTKIM-------FMSVDEAVTTPMLNLGSYMFKCKVPPFSFHAFELGKMYSVESGDYFMTASTTELCNDNNLRIHVHVD-- | |||||||||||||
8 | 6j9fC | 0.13 | 0.03 | 0.21 | 0.19 | CNFpred | --------------------------------------------------------------------------------------------------------------------------------------------------------------------DGTVIDVQVFTRDGIEKDKRARQIEE----NEIKRVKKDFDDQFRILEAA | |||||||||||||
9 | 2pffB | 0.04 | 0.03 | 0.78 | 0.67 | DEthreader | ------------------DDKDYLLISPLVILAVATPGERSYLKG----T-----------LVTAVAIAALFIGYNSPML-SISNLTQEQVQDYVNVEIVSGFVPFHSINDLVNNV-F--KD-LGSISERIDCIRLPVKW-----ETTTGLGLTHRNGGGGGGGGGG----GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG-GGG | |||||||||||||
10 | 6etxG | 0.10 | 0.09 | 0.98 | 0.72 | MUSTER | RDRWLRVLSPFAPDYIQRSLFHRKGINEESCFSFLRFIDISPAEMANLMLQGLLARWLALFLSLKASYRLHQLRSWGAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQVVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSY----CNDRSAEYERRVLKEGGSLAAKQCLLNGAPELAADWLNRRS | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |