>PF11912 (208 residues) MKFLITLLVVFIINILFVKSQVQYVNFQPFSNGKCSGNSQGIGYSIQLDTCTTYDRNNTY MFTSSSNQVKWAKYSVENVIEPVCSGSATTTQTVKIGNCIKNTNIAFDESSLPAVQYFYK VSISNQPLINSNSYIKSFMYNVDSCNENEVTNIQYFSNATKAIEKSTSRPSSYYCSASNQ PYTYYCSIWGCGPSYTSANCQQINSTSP |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | MKFLITLLVVFIINILFVKSQVQYVNFQPFSNGKCSGNSQGIGYSIQLDTCTTYDRNNTYMFTSSSNQVKWAKYSVENVIEPVCSGSATTTQTVKIGNCIKNTNIAFDESSLPAVQYFYKVSISNQPLINSNSYIKSFMYNVDSCNENEVTNIQYFSNATKAIEKSTSRPSSYYCSASNQPYTYYCSIWGCGPSYTSANCQQINSTSP | |||||||||||||||||||
1 | 2opwA | 0.06 | 0.04 | 0.73 | 0.70 | DisCoVER | LEGFLSASGDKIRFFFEPEKSINKIGHAHATHVQLQMPVVVQSMYIFKQPHFGHQDASFGVWIAVEDATCLWFIPVSRRMVFLGSEPLFVPTPVQRGALV----LIHGEVVHK-------S-K--------------Q---N--LSDRSRQAYTFHLMEA--S--------GTTWSPENWLQPT---------AELPFPQLY------ | |||||||||||||
2 | 2ichB | 0.05 | 0.04 | 0.75 | 0.67 | DEthreader | --------------AHNDFRI-EWWYVTGWPLGLSDIGKLQH----------------NTDVKLDD-W-IFVRE-T---------DGRYR-TRIEAEDFTLTFILTPSQHLQVSVTGTAWLDREWSSEYLPAAGWDWISANLDGS---AL-AFQI----KDDSKIDVSFHPTWRSARTQAVYPVTRVLTEWQIT-PLDDQGAVTFTRD | |||||||||||||
3 | 2xe4A | 0.07 | 0.07 | 0.98 | 0.59 | CEthreader | DDIYAEHISHINEDDMSAPYVYGKYRYYTREVKGKPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAFCDVMEVKPAPPEHDLVAFSVDMSG-----NEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTL | |||||||||||||
4 | 6jnfA | 0.04 | 0.04 | 0.86 | 0.62 | EigenThreader | HR----------------QSLELVNPGT--VENLNKEVSRDVFLGLRADLNKAFSNPAFQTSHTFPKYAFSALFAND--------NLFAQGNIDNDLSVLNYGWKNISKDGQPTMCQLEQSVLQSVT----PQLALGLETLYGSAPGDAGVSYLTRYVWIFSGQQANGALIASLWRNVEAGIETTLQAPTVEGSTTIGATAGNQELLM | |||||||||||||
5 | 1c01A | 0.16 | 0.06 | 0.35 | 0.24 | HHpred | ------------------------SAFTVWSGPGCNNRAER----YSKCGCSAIHQKGGYDFSYTGQTA--ALY-----NQAGCSGV--AHTRFGARACNPFGW------------KSIFIQ-------------------------------------------------------------------------------------- | |||||||||||||
6 | 6mf4A | 0.08 | 0.05 | 0.64 | 0.88 | MRFsearch | --LTLNGIVEAEAQYKMGGLPKHPMIVTKWVDY---SNKHGFSYQLSTDIGVLFNNGTTVLRLA--DAEEFWYISYDD------------------------------------REGWVASHYLLSEYHKDDVFLRRYTRY-------KPFVMFELSDGTFQFNFK-DHHKMAISDG-GKLVTYIS---------------------- | |||||||||||||
7 | 4rs6A | 0.10 | 0.08 | 0.74 | 0.46 | FFAS-3D | --VADTVARVLRGCLENMPEADCWVKWVDYSNK------YGFGYQLSDHTVVLFNNGAHMSLLPDKKTVHYY-------------AELGQCSVFPATDALMDGGDLPSVTDIRRPRLYLLQWLKS-----DKALMMLF--------NDGTFQVNFYHDHTKIICSQNEEYLLTYINEDRISTTFRLTT-------------------- | |||||||||||||
8 | 6x79A1 | 0.08 | 0.07 | 0.84 | 0.67 | SPARKS-K | ----------------AYTNSFTRGVYYP-DKVFRSSVLHSTQDLFLPFPVLPFNDGVYFASTEKSNIIRGWIFGTTLDS--KTQSNNNVVIKV----CEFQFDPFLGCTFESFKNLREFVFKNIDGY------FKIYSKHLVRDLPQGFSALEPLVDRFQTLLALHAAYYVGYLQ--PRTFLLKYNENGCALDPLETKCTLKSFT-- | |||||||||||||
9 | 4r04A | 0.14 | 0.08 | 0.60 | 0.78 | CNFpred | KNYLISNLSNTIEKINTLGLDSKNIAYNYTDE----SNNKYFGAISKT-------SQKSIIHYKKDSKNILEFYNDS-----------TLEFNSKDFIAEDINVFMKD--------DINTITGKYYVDNNTKSIDFSISLVS----KNQVKVNGLYLNE------------------------------------------------- | |||||||||||||
10 | 6mgjA | 0.03 | 0.02 | 0.70 | 0.83 | DEthreader | NTLFRSRIF-KLGWYGTGATETAVLG------------------TALGSGFIDYEPSYVRVGSADKEPKSIGISNDG-GV--NW---YPNSEPTTVSDIGVYYSGAS-NPNYGGATF----------QPNEAQ-----------------------I--S-KAVPGIEDIWFAGGNTNKYGLWHSTNSGASFTKLTNVEEAGVFNVLY | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |