Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | LPEPLQPLRELAYNLHWSWDHETIALFRRLDRELWESSGHNPVRMLGTIRQERLEEAASDPGFLAHLERVHQRFRHYMQARTWYEACYGVQKSACIAYFSAEFGLTECI |
1 | 6y55A1 | 0.15 | 0.10 | 0.68 | 1.15 | HHpred | | ------------------GVENVTELKKNFNRHLHFTLVKDRNV----------------ATPRDYYFALAHTVRDHLV-GRWIRTQYYEKDPKRIYYLSLEFYMGRTL |
2 | 6kihA | 0.07 | 0.05 | 0.65 | 0.58 | DisCoVER | | AMAQIANVCVVPVAIEAMAC-GT--PV-IAS--AVGLQTVETGLLVPPQDANALANAIQ--RILADPAWARTLG-----------------------------KNGRV- |
3 | 5x5hA | 0.07 | 0.06 | 0.91 | 0.83 | DEthreader | | GGPIVALEQTVAAL-EG----SSGMAATDILFRILIAKLVVDLHATNDQEDEELLFMQGIGP-IPSVFDAYLTARGLKTLAVRMDRHDNAEKIAVYPGHVAKQMK---- |
4 | 3nf4A | 0.05 | 0.05 | 1.00 | 0.54 | CEthreader | | DSGRLGIAAVATGLAQAALDEAVAYANLGFLLADMAAAVATARATYLDAARRRDQGRPYSQQASIAKLTATDAAMKVTTDAVQVFGGVGYTRDYRVERYMREAKIMQIF |
5 | 4cruA | 0.09 | 0.09 | 0.98 | 0.65 | EigenThreader | | AIERAVVVDRSIAHHMMRNLTAGMAMITCISTNLKNSFASALEMMDQAA--AQLAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGGVDPKQLAVYEEF |
6 | 4bqeA1 | 0.11 | 0.07 | 0.70 | 1.20 | HHpred | | -----------------PEADDATEIAGNIVYHAKYSPHFSPL------------KFGPEQALYATAESLRDRLQLWNETYVHFNKV----DPKQTYYLSMEYLQGRAL |
7 | 4bqeA1 | 0.11 | 0.07 | 0.67 | 0.57 | MRFsearch | | --------------------DDATEIAGNIVYHAKYSPHFSPLKF------------GPEQALYATAESLRDRLQLWNETYVHFNKVD----PKQTYYLSMEYLQGRAL |
8 | 6gcvB | 0.13 | 0.09 | 0.72 | 0.49 | FFAS-3D | | LAATIAQYERSAADLDAGNAPEIAAQRQKV-AQIWGRYRAMLDQVAQPASQVDLRGFSQYTELLGELNNLVSLMSARAD------------------------------ |
9 | 6w2rA1 | 0.16 | 0.13 | 0.80 | 0.76 | SPARKS-K | | LEKVARKAIEAAREG------NTDEVREQLQLEIARESGTTAVKLALDVALRVAQEAAKNKDAIDEAAEVVVRIAEESNNSDEIAKAVLKSEK---------------- |
10 | 3a11A | 0.08 | 0.07 | 0.96 | 0.47 | CNFpred | | ----RSAAYALQLQAEKSKATNVDEFWKEMKAKILFETRAVSLPNALRYVMHRGKIAYDLEQLRFVIINAAKEFIHNSEKARIGEFGAKRIDGDVIMTHCHSKAAISVM |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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