Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | KIDEDFMKELISQGVPAKRESQPDDAPQPGGETGTAQEGQQTETVRVEKTTPRKRKGGSGDYRETYFQKVELADRQPLYVSRTTHEKLMRIVTVIGGRKVTVSSYVENILLHHFEQYQDEINTLYES |
1 | 4wpxA | 0.06 | 0.03 | 0.56 | 0.78 | DisCoVER | | -----QIQ--YT-------------------------------IP-PREDYNKLSDEQKTRISEAFLLSYEFYDMLVRHG-------QR--PANWPHCPPVYRQF--NLATAQ-ALA--GTLIR--- |
2 | 4a01A | 0.05 | 0.04 | 0.76 | 0.83 | DEthreader | | SALFGRVGGGIYGVGIMGLFGAESCALVASGLTALPTSFKSWQL--CAISIILSLFLGAMLPYWFSAMMKSGSAAS---SNTGGAWD----------G--IGDPLKTSGPSLN-------------- |
3 | 5zbiA3 | 0.07 | 0.05 | 0.68 | 0.62 | CEthreader | | -----------------------------------------HRMHVDDSIESIAKLLFGSGAKASEMMNTIRPPGQPLVSDWDCLKTMVRTFETHCGSLSYTRFLANICNSIQKEKMGEASAQVCLN |
4 | 4iuwA2 | 0.05 | 0.05 | 1.00 | 0.53 | EigenThreader | | DDLLTAILKLSAQTQAFWFKQLGQTVDRNQWNMPGHLVNAGILQPPYYSLKWTRAENLGGTGATIGHEISHSFDNNGALYDEQAFDQLVKAMAAQFDTVSENMADNAGMDVALALKDLQAFFITYAR |
5 | 2k9iA | 0.16 | 0.06 | 0.40 | 0.38 | HHpred | | ------------------------------------------------------------------PYKLLNGIKLGVYIPQEWHDRLMEIAKEKN---LTLSDVCRLAIKEYLDNHDKQ------- |
6 | 3veaB | 0.08 | 0.06 | 0.65 | 0.48 | MRFsearch | | --AQDAVEQLMKLEN---------------------------------------EPVKVQEWIDAHMNVNQHTRKKSIDLEFLVWQRLAVLARRRG---NTLSDTVVQLIEDQMSSLKQDLKDILDK |
7 | 6tb4A | 0.11 | 0.11 | 0.96 | 0.53 | FFAS-3D | | ----ERLKRDILALPAITRESGKKGMVNSVITQTRQALIPKVPVVTRPTNVPGNSVQWAQDVIHGFQALLASEIYE-LPEMDNLRTRMTGISREHGPVDDSVIEIMLIGLEQHLKGIVEAAIDIVKY |
8 | 5ch1B | 0.07 | 0.06 | 0.96 | 0.71 | SPARKS-K | | IKFTAIKDIKAGEELFFNYGDNFPNLTKKLPLLVPKTTQPLSKVQLLPGQPLPQHPIDDSWLLLKHRDNQDFID-----LRPEEKEFLQEWDAFILRRHISSEQYLPRYFLRFVREKADWLVSKRSR |
9 | 4p5wA | 0.19 | 0.13 | 0.68 | 0.42 | CNFpred | | EIQLEHAKQAFVQRDNARTGRV-----------------------------------TAIDFRDIMVTI------RPHVLTPFVEECLVAAAGGTTSHQVSFSYFNGFSLLNNMELIRKIYSTLAGT |
10 | 6kptA | 0.07 | 0.06 | 0.82 | 0.83 | DEthreader | | SNVRDQVFNLEFGVDAALQALIHILGATLST---------------LEAKVRSLMTQ----Y--GL-AIYTTFVHGEIQFIKNRLATALADVQMFLMAVG-LLSGWLLAASFFAKNMLPLLTSTRQI |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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