Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | VPVPMPDLALPASFDSDNPTHRYRSLDSSNPWLVRPVLDTHGWDHDVGYEGINVERLFVAKKKFPISFSGQVTKDKRDANVQMELASSLKHGEGKATSVGFDMQTVGKDLAYTLRSETRFSNLKKNKATAGISVTLLGDALSAGVKFEDKLIANKQFQVVMTGGAMTGRGDLAYGGSLEAQLRDKDYPLGCSLSTLGLSIMDWHGDLAIGCNIQSQVPVGRSTNLIARANLNNKGAGQVSLRINSSEQLQVALIAVLPLLKKLFE |
1 | 4fqeA | 0.05 | 0.03 | 0.64 | 1.08 | CEthreader | | -----------------------------------------------------------------VSIDYRHEM-QDGHKDRLLISHRF----ANGFGLSSEVKWAQVSNGTEVVASYVYKFNSVFSIEPGFSLESGSSNNNYRPYLRGRANVTDDLSVALRYRPYFK--RKGYTLTGNIDYTFLK-----DYTIGYELEYKKGTSYDITHNVKLSYKWDKNWKPYVEVGNVSR---QTRYRVGVQYSFH--------------- |
2 | 7ck6A | 0.06 | 0.05 | 0.81 | 1.02 | EigenThreader | | IQMEGVLSNHSTIGESNYHFGVTYVGTEAFPVLVGDMD--------NSGSLNAQVIHQL--GPGLRSKMAIQTQQS-KFVNWQVDGEYRG---SDFTAAVTLGNPLVGSGILVAHYLQS---ITPCLALGGELVYHRRGEETVMSLAGKYTL----NNWLATVTLGQ---AGMHA--TYYHKASDQ-------LQVGVEFEASTDTSVSFGYQFKGSVDSNWIVGATLEKKP-LPLTLALGAFLRKNI----------------- |
3 | 2jk4A | 0.12 | 0.10 | 0.80 | 1.00 | MRFsearch | | ------GSAVPPTYAD------------LIKLDLKTKS----------ENGLEFTSSGSANTKVTGSLETKYRWTEYGLTFTEKTEITVEDQLARGLKLTFDSSFKNAKIKTGYKRLGCDMDFDIAGPSIRGALVLGYEGWLAGYQMNFETAKSRVTQSNFAVGYKTD------EFQLHTNVND--------GTEFGGSIYQKVKKLETAVNLAWTAGN-SNTRFGIAAKYQIDPDACFSAKVNNSSLIGLGYT----------- |
4 | 2yfnA | 0.10 | 0.07 | 0.66 | 1.15 | CNFpred | | -----------------------------------------------------------------QTLEIVLADE--NAQVEVHLLYGVLEE-NDVITRSVRIKNTGGQITIEKAAAACLDFV-----QGEFDVLRFYG-AMERNLERTPLGH-GTIAFGSRRGTSSHQ------YNPAVILAEKGTTET-AGSCYGMLFV-------YSGNFSCEAEKDQFNQTRLLLGLNE-TVPEVILSYSA-EGLSALSQQYHNCIRNHVC |
5 | 3efmA | 0.05 | 0.05 | 0.94 | 1.17 | DEthreader | | LREFAATFNASVYVRG----DADISVPITGRIRSRLVAAYSQ-----RRTFYGVV-SADLTPDTVLTTSVEYQHNHDTEATTYFVDLTHRFTNDWKLRAAYSHTDGRYLDRDDIHFSLSAPFEHEVALGWMSIDNHSDDVRTKQTGAYLVGRFLLHLIVGDRWSDWKTKEYRINQFTPYAGLTYDINDTYTAYASYTEIFQPQNILPIKSKSYELGLKAAYNTSAALFQTRDNASGAKVGIDLEAAS-YT--HF--TT-KDASGN |
6 | 7ck6A | 0.10 | 0.08 | 0.83 | 1.07 | CEthreader | | LSPTEAFPVLVGDMDNSGSLNAQVIHQLGPGLRSKMAIQTQ--QSKFVNWQVDGEYRG----SDFTAAVTLGNPDVLVGSGILVAHYLQSITPCLALGGELVYHRRPGEEGTVMSLAGKYTLNNWLATVTLGQ---------AGMHATYYHKASDQLQVGVEFEASTRMQDTSVSFGYQLDLPKAN-------LLFKGSVDS---NWIVGATLEKKLPPLPLTLALGAFLNHRKNKFQCGFGLTI-------------------- |
7 | 4fnrA | 0.10 | 0.06 | 0.67 | 1.10 | CNFpred | | ----------------------------------------------------------------AETLEIVLGDA--LIGLEVTLQYTAYEK-WNVITRSARFENKGGERLKLLRALSMSVDFP--TADYDWIHLPGA--GRERWIERRPLVT-GVQAAESRRGASSH------QQNPFIALVAKNADEH-QGEVYGFSFVY-SGNFLAQIEVDQ------FGTARVSMGINP-QTPEVVMVYSD-QGLNGMSQTYHELYRTRLA |
8 | 6fokA | 0.07 | 0.07 | 0.92 | 1.17 | DEthreader | | ELGSRVNASLLARFDK----VLDAAAGNRLG-YLRFTGNHAQ-----KWNGDVAVGWTPD-EDTLIELTAGKGDGEQFKRESLGLRFVKNVSDVLKVEAQVYYNYADDRRTLGGRLAATWRWDFKLVTGVDAMRNEHRDAVFHNYGAFGELTWFARLIGGLRLDRASVKTRADTLPSGFVRYEHDLASPTTLYAGLGHAERFPDKKPEKTTQLDFGLQYNLQAWASGYVGVVQDDARIMGGELGAAS-LA--YA--W---S--D- |
9 | 2jk4A | 0.09 | 0.08 | 0.88 | 0.94 | DisCoVER | | GAVPPTDVFTKGYGFG--LIKLDLKTKSENGLEFTSSG----SANTETGSLETKYFTEKWNNTLGTEITVEDQ---LARGLKLTFDSSFSPNTGKKNAKIKTGYKR-EHINLGCDMDFDI-----AGPSIRGALVLGYEGWLAGYQMNFET--AKSRVTQSNFAVGYKTDQLHTNVNDTAVNLAWTASNTRFGIAAKYQI-------DPDACFSAKVNNS-SLIGLGYTQTLKPGIKLTLSALLDGGHKLG--LG-LEFQ-AR-- |
10 | 5fokA | 0.05 | 0.04 | 0.70 | 0.83 | DEthreader | | DDRSASDGMRDVASQ-TREVVEQIEVS----KGPGSAYTGAG----S-TGGSLN---------IKHTLVTGLEFSY-----VFDTLELN------GLVYK-------------NGSIYLA-------ELGTKW-------DALSLNAALFRTDKARRVQGVELGFNGKEKWKVFGGYTYLDSEIRKSTKEGNKMAQNNFTLWTTYIGGGTTYVDKQYNTA---TYIPSYWRYDAVQNLYFDQVYS-------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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