Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | GIVVFVVATIAMLIFAAATQGFMLTRNRWYESILLLLVAFTLFRPGFWMDMIHDPYRSIPASQFVQALGEMDDDSTLRVQVAGEDAYGDPLTTYMTLPVPEGDTGEERLENFGLELLVKDGDLVVDMVAFGSQAEKLGFDFDQKIIEVMAPVDRWAKEWMWIPALAVFALIVLMQRRRR |
1 | 2eaqA | 0.23 | 0.08 | 0.35 | 0.62 | DisCoVER | | ---------------------------------------------------QFSDMRIS------------------INQTPGK------SLD-F-----------------GFTIKWDIPGIFVASVEAGSPAEFSQLQVDQETGHLVMDVRRY------------------------ |
2 | 3o8lA | 0.04 | 0.03 | 0.77 | 0.83 | DEthreader | | GCFNWEVYKLLAHIRPP--A-PKSGSYT--VAVMAVRTRYVGGWTGQ--GGSGTATTMGGYCGY-LATMAGLA-------------------------AG-ADAALNVEHLGLVLRCNENYTTFFNLSGKIFDSR---K-----NVLGHMQGSPTFRNFATKMGAKAMNWMAGKIKEYG |
3 | 5x5yF | 0.08 | 0.08 | 1.00 | 0.59 | CEthreader | | RIPGFLQLILPLGLFLGILLAYGRLYLQKRLLGYTMAPALLVAILAWLSLFLAPQGINTEFDTLVPGRFQAMRDGTRVTYTEELSKDRGELAGIFISQKDLSNQERGISILVAEKGTQNIRYLILHNGYGNPGQANYRAIQYDTYGVMLPKPDAVPRLSTPLLVFVVTLLAVPLSRVNP |
4 | 3wmeA1 | 0.05 | 0.04 | 0.77 | 0.63 | EigenThreader | | GSRTALFGIASERLARDLRVAAFSNLVEQGKLNNDVQVIQYSFSKLGAVLFNLAQCVVGII--------------VAFIFA----------PALTGVLIALSPLVVLAGAAQ------------------MIWGGQLIARGSLNAFFSAILGFMGVVWPDVTRGLGAGGELFAMIDRVP |
5 | 1p1dA | 0.18 | 0.10 | 0.55 | 0.58 | HHpred | | -----------------------------------------------------IPTEDSTFEEANQLLRDSSITSKVTLEIEFDVAESVSGTFHVKLPKKH-S------VELGITISSPGDPLVISDIKKGSVAHRTGLELGDKLLAIDNRLDSCSME--------------------- |
6 | 3pv2A | 0.18 | 0.12 | 0.64 | 0.52 | MRFsearch | | --IITQI----------------------------------------------NDTKITQATQVKTTISLLRVGSTVKIIVERD---NKPLTLSAVVTD--IKSHEQKLQSYGLALRAFVIGVQVVGASENSAGWRAGIRPGDIIISANKKP-----------VTDVKSLQTIAQEKK- |
7 | 5doqA2 | 0.08 | 0.06 | 0.80 | 0.52 | FFAS-3D | | -AHVLATSYMTSAFVLASIAAWHLWKGNRHIHLTMKTAFIFSVASALVGDLSGKFLAEYQPEKLAAAEWHFETSSHAPLILFGTLEEDNEVKYALEIPYALSI--------------------------------LAHNHPAAVVTGLNIPEDERPPLYIHYLFDVMVTIGVFLMV--- |
8 | 1p1dA | 0.13 | 0.13 | 0.96 | 0.85 | SPARKS-K | | ADPVTGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFDVVIPSSGTFHVKLPKKHSVE-------LGITISSPSSPLVISDIKKGSVAHRTGLELGDKLLAIDNIRLDSCSMEDAVQILQQCEDLVKLKIRKD |
9 | 4eatA | 0.09 | 0.08 | 0.92 | 0.63 | CNFpred | | LLLMLDGTDWPVAFLGAIYAGIVPVAVNTLLTADDYAYMLEHSRAQAVLVSGA------LHPVLKAALTKSDHEVQRVIVSRPAA-PLEPGEVDFAEFVGAHAPLEKPAATDPAFWLYSPKGVVHTHANPYWTSELYGLREDDVCFSAA--------KLFFAYGLGNALTFPMTVGATT |
10 | 6hraB | 0.07 | 0.05 | 0.75 | 0.83 | DEthreader | | ---L-ALTIVFLATATL--WPFSANAVSVTVLVALLVCLIP--TTIGGLLSAIGVGMSMLGANV-------------IAT------------SGRAAAVDVLFQL-KTVMIAMTG---------DGTNDAPA-LAQAAAAAKEMVDLVIGKMTRSLTTFSIANDVAKYFAIIPAAFAAT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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