Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | RLRNEAKNPPKPGMPAMRGQEAAASKAESLAMKGFAFAASHPSIYHMGTWSATKMKALMPSNLGPWTQCRTAPKPASKTLHQLIKARK |
1 | 1fyzF2 | 0.08 | 0.06 | 0.73 | 0.57 | DisCoVER | | DFR--HK---------TA-FGEDAKSVLDGTVAKMN-AAKDKWEAEKIHIGFRQAY---K--PPIM--PVNYFGERQLGRLMEL---- |
2 | 1t06A | 0.03 | 0.02 | 0.90 | 1.00 | DEthreader | | ---IYNGAVGVATYFGIFWGAYFYLKMSAGWSCYCWLLGNRKDFSYVPLHKAVEIAKEVGI-VEVK-SSLLNAEIQLGLGFK-R--V- |
3 | 3jacA | 0.04 | 0.03 | 0.77 | 0.51 | CEthreader | | --------------------GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
4 | 2j91B1 | 0.06 | 0.06 | 0.88 | 0.55 | EigenThreader | | RFRGSFLQLF----EGDDHKVEQLDKMVTEKAVDIEVLS----VLASLGASVHKICTDI---RLLANLKEMEECCSLARHLMTLVVQW |
5 | 3k70C1 | 0.13 | 0.09 | 0.68 | 0.21 | HHpred | | ------------------------FNKQSMSWKLMTYLTDKRKLFQLSSKAADLFDQYLPDWLAQWETGHLVEGLGEA---QAWQAP- |
6 | 3k70C1 | 0.14 | 0.10 | 0.72 | 0.53 | MRFsearch | | -------------------------NKQSMSWKLMTLLPQKRKLFQLSSKAADLFDQYRPDWLAQWETGHLVEGLGEAQQAPLWKALV |
7 | 5y0eA3 | 0.11 | 0.09 | 0.82 | 0.43 | FFAS-3D | | -MSQRLLQP---------GRGGSSEMVDFMLLQLINRHLGHPRLFADWLQFATELASFSAQRTPE----GRLPVYDHDNLALCFGK-- |
8 | 3mv2A2 | 0.08 | 0.08 | 0.97 | 0.71 | SPARKS-K | | ---KEGNTVRMLELAAYFTKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSGPRAEQARKIKNKADSMASDAIPIDFD |
9 | 3hfwA | 0.17 | 0.10 | 0.59 | 0.51 | CNFpred | | --------------------------LIQVSIESGRMTHHHPTGYLGALASALFTAYAVNRPPLQWGK----------GLMELLPEAK |
10 | 5mpbZ | 0.06 | 0.06 | 0.92 | 0.83 | DEthreader | | ---L----NFRTAIELVMTAKGKSSDKDATTDGKNDDEEEEKEAGIVNEHIRRMVPLAMGIVSDPQMKVDTLTFSDAGQAGRPHGERA |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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