Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | SKGKIISGSSGSLLSSGSQESDSSQSAKKDMLAALKSRQEALEETLRQRLEELKKLCIREAELTGKLPKEYPLDPGEQPPTVRRRIGTAFKLDEQKILPKGEEAELERLEREFAIQSQITEAARRLASDPNVSKK |
1 | 2zqmA | 0.06 | 0.03 | 0.47 | 0.67 | DisCoVER | | -----------------------------------------------------------QLQLVVQQKQKVQLEL-TEAKALIESLPDDAVV---YKTVGIVKTTKDKAVAELKEKIETLEVRLNAL-------- |
2 | 1bdgA | 0.10 | 0.08 | 0.84 | 0.83 | DEthreader | | --GTETG--NFVTLE--------MKDK--KF--DL-GFTFVVNDTVIGTNTEWGAFGEGELD--CWRDKDKMVS--GMLGERHVYLVEQKGLPLVPVVEPIDNRIVRYACEMVVKRAAYLAGAGIACILRNKPK- |
3 | 5tsjN | 0.06 | 0.05 | 0.90 | 0.46 | CEthreader | | GTFLEHLGVFGTPEHPGLIPILIHRIDTA-----------KTANLLILLSVAFGVVMVFAGLILRAYLG---LKHRHMAHFWEGVGYLGGLLGILALAASYLGNLQAGWLSALMYLGFGVFLLSVVMSSIWLMIP |
4 | 4yzfA1 | 0.06 | 0.06 | 1.00 | 0.62 | EigenThreader | | PAITFGGLLGEKTMGVSELLISTAVQGILFALLGSFLVRFIYTQEIFSFLISLIFIYETFSKLIKIFQDHPLQKTYLPNTALLSLVLMAGTFFFAMMLRKFKNSVIGDFGVPISILIMVLVDFFIPLGLRSEFPI |
5 | 3qneA | 0.10 | 0.08 | 0.81 | 0.38 | HHpred | | --------------------AKEDAKDLIAEKEKLSNEKKEIIEKEAEADKNLRSKINQ---VGNIVHESVVDSQDEENNELVRTWTPENYKKPEQIAAKLSHHEVLRLDYGVFLNQALINYGLSFLSSKGY--- |
6 | 1u4qA | 0.22 | 0.13 | 0.58 | 0.42 | MRFsearch | | -----------------------DTSQVKDKRETINGRFQRIKSMAAARRAKLNESWIKEKKLL----------------------------------VQNLRKKHKRLEAELAAIQGVLDTGKKLSDDNTIGKE |
7 | 2ezpA | 0.14 | 0.10 | 0.71 | 0.63 | FFAS-3D | | -------------------------QQQQQLLDVVKRQQELLRKNLQTRVTAIEKY-LKDQAQLNAWGAAFRQVAHTTVPWPNASLTPKW-------------NNETWQEWERKVDFLEENITALLEEAQIQQEK |
8 | 3dyjA1 | 0.12 | 0.10 | 0.83 | 0.62 | SPARKS-K | | DLDTTIFATAGTLNREGAETFADHREGILKTAKVLVEDTKVLVQNLAQAAQSSVATITRLADVVKLGAASLGAE-----------------------DPETQVVLINAVKDVAKALGDLISATKAAAGKVGDDPA |
9 | 1u5pA | 0.14 | 0.09 | 0.61 | 0.49 | CNFpred | | ------------------------------SVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSS--------AFDTSQVKDKR--------------TINGRFQRIKSMAAARRAKLNESHRLHQFFRDMDD |
10 | 3l0mA | 0.12 | 0.08 | 0.70 | 0.83 | DEthreader | | ---------------------SPYSDAKA-LDEVAKIRELGVQRVTRIENLENAKKLWDNANSLNYAANELKFKLKED--LLWGAYVGKSKVIAAQAADEQSLKQIVAELKSKDEYRI----------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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