Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | SAWRGRRGQLRKQLRAAKTYEEWKQVALELDEYMRFNQWKTTDEDPFYDWRLVRKVRRSLKTLREKDDARGILGVLETCIRNNFAGIESPRLYSETFYGTKNLIEDYINEQEKALRYVLDTSHLSKEEKRRFFKTVN |
1 | 3himB | 0.06 | 0.06 | 0.91 | 0.61 | DisCoVER | | ------AARIRAAAIEVYGATTTREIAASVYPHYKESLLYA-----IS-LEGHHSVLAAITAADFPIAAPDRLMSTVTAYVTWHNRASARVGQYELLSHFAIIADIRRSTTKVFTRIIEAGADFIEAAALAITSLG- |
2 | 5levA | 0.03 | 0.03 | 0.92 | 1.00 | DEthreader | | -------PMPLLINLIVLGFLIILFCFIPFPFLPHEFVAGVYFGNT--VYYYMGLLAVFCTNAINILAGIGLEAGQSLVISASIIFNLELRDHVFSYF--TAGVGIMLLFFMPQVFNFTLINLLIHNLLLLLLLQIL |
3 | 3on4A | 0.10 | 0.10 | 1.00 | 0.51 | CEthreader | | NTKERILAVAEALIQKDGYNAFFKDIATAINIKTASIHYHKEDLGVAVISWHTDKIAAVLSDISNNLSAKEKIQKFFDAILTLTCLGGFASDFQSLPVSIQNQAKKFFELIIEWLKGVLETNGYDNESSLSLAKQII |
4 | 2wv1A | 0.07 | 0.07 | 0.96 | 0.60 | EigenThreader | | -SREQTMENILKAAKKKTSIQEIAKEAAMASYYFNGKENLYYEVF----KKYGLANLPNFLEKNQ-FNPINALREYLTVFTTHIIGTLAYEEIIKESARLEKYFIGSFEQLKEILQEGEKQGVFHFHTIHWITSIVL |
5 | 6jlcA | 0.11 | 0.10 | 0.94 | 0.31 | HHpred | | ---NAAVETLKEIEPKSKEFDKLFATATELTQS--LAVVAG-GYQTLANPDLIMARTHLIVEIGLTVSANNLRYKIQK-AHVELFSVTRAIMRVANIGATVYQLNDSISDLRATYERVSTYRDLKSTDKDLLNKAI- |
6 | 6ianC | 0.13 | 0.13 | 0.99 | 0.40 | MRFsearch | | --LRGYIQVAEKKLAGVPDKEALLNACKSLRAALELAEKGVELQQQLISSRQRSTEHNRLQNLRRDARVDVIVRRLRDEIQTNKIQRENAEFDRLISEPLDQALTTENQQLDEALKKLHQQVKGEDGSTIATIKQQV |
7 | 6jlcA1 | 0.11 | 0.09 | 0.81 | 0.67 | FFAS-3D | | ---NAAVETLKEIQSEEKEFDKLFATATELTQSLAVVA---GGYQTLANPDLIMARTHLIVEIGLRYKIQKAHVELGFSVTRAIMRVANI-------GATVYQLNDSISDLRATYERVSTYRDL------------- |
8 | 5cwjA | 0.15 | 0.13 | 0.91 | 0.90 | SPARKS-K | | -DSEEEQERIRRILKEARTEESLRQAIEDVAQLAKK--------SQ--DSEVLEEAIRVILRIAKESGLRQAIRAVAEIAKRVILRIGSEEALRQAIRAVAEIAKEVLEEAIRVIRQIAEESG--SEEARRQAERAE |
9 | 5cwhA | 0.17 | 0.15 | 0.89 | 0.59 | CNFpred | | --VNERVKQLAEKAKEATDKEEVIEIVKELAELAK----------QSTDSELVNEIVKQLAEVAKETDKELVIYIVKILAELAK-QSTDSELVNEIVKQLAEVAKEAVIYIVKILAELAKQS--DSELVNEIVKQLE |
10 | 2veqA | 0.05 | 0.04 | 0.94 | 1.00 | DEthreader | | LQKDQSLAIFSVYPLHSNLDGMQLVMCQNFARC-A-LILATREYNSRFFIALFQISTVSWKLFKMYLSLLKVIHYSKVII-SLIVNNFHAKSEF-F--NRHPMVMQTITRVVSFISFYQIFV--ESAAVKQLLVDLE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|