Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | TLLVATTLASSVLFSSCIGSFGLTNKLLDWNKNIDSKFVNELVFIAFWIVPVYEISALADILVLNSIEFWSGDNPVADAGTVKTINGKDGVYTVETKKDGYHIQKEGEEKAIDLVFNESDKSWSVEADGEATKLLKFKDNDEVVMYLPDGKEMNVELNQAGVL |
1 | 4ld1A1 | 0.14 | 0.08 | 0.55 | 0.62 | DisCoVER | | -------------------------------------------------------------------LPDGGRLVVFPNGTRKELSADGQTVKVMFFNGDVKHTMP--DQRVIYYYAE-AQTTHITYPDGMEVLQFP--NNQTEKHFPDGRKEITFPDQTVK- |
2 | 1kv9A1 | 0.07 | 0.06 | 0.79 | 0.83 | DEthreader | | ---------------------------VD-AIWLRTYER-ATPL-YTSMRVDPNVGTLSIGNGVWDSGTGLSSIQITLMQAPKNGMW-SPFGAHNMFLVYIPYQEVAVSGALLGTLSTAGNLVFQGTA-HAQAPMTFELARQYVAIMAGSRLLVFALDGKA-- |
3 | 2fkjA | 0.13 | 0.12 | 0.87 | 0.43 | CEthreader | | ----------------NSVSVDLPGEMKVLVSKEKNKDGKYDLIATVDKLELKGTSDKNNGSG------VLEGVKADKSKVKLTISDDLGQTTLEVFKEVSKKVTSKDKSSTEEKFNEKGELSEKKITRADKSSTEEKELSEKKITRADKSSTEEKFNEKGEL |
4 | 6t9iD | 0.07 | 0.07 | 0.98 | 0.65 | EigenThreader | | LFLNLVVYARRFFDRFSPDFKDFHGSEINRLFSVNSIDHIKEN--EVASAFQSHKYRITMSKTTLNLLLYFLNENESIGHYFATASHDQDVDCVSFHCYVFTGSSDKTAPVISIAVCPDGRWLSTGSEDGIYSLSYSKEGNVLISGGA-DHTVRVWDLKKATT |
5 | 6fb3A | 0.11 | 0.06 | 0.55 | 0.34 | HHpred | | ----------------------------------------------------------------NSLKVRRD-----ASGMPRHLLMPDNIVTLAVGTNGGLVSTQ-TLELGLMTYNGNSGLLATKDEGWT-TFYDYDHEGRLNVTRPTGVVTSLHREMEK-- |
6 | 4by2A | 0.14 | 0.06 | 0.45 | 0.35 | MRFsearch | | --------------------------------------------------------------------------------FKREITNADGSKDIWYP-NGNLKKISADGMNLRMLYFN--KDIKETNIREGTVKYYYAETNTWHTSYLDGLEILEF------- |
7 | 4by2A1 | 0.13 | 0.07 | 0.55 | 0.52 | FFAS-3D | | --------------------------------------------------------------------LPRLAPRPSAAVFKREITNADGSKDIWY-PNGNLKKISADGMNLRMLY--FNKDIKETNIREGTVKYYYAETNTWHTSYLDGLEILEFPNGQ--- |
8 | 4ld1A | 0.11 | 0.07 | 0.69 | 0.74 | SPARKS-K | | --------------------------------------------------LPDGGRLVVFPNGTRKELSADGQTVVMFFNGDVKHTMPDQRTTHITYPDGMEVLQFPNNQTEKHEITFPDQTVKTLHDGREESVIQLNPDGSKVIQFNTGQREIHTADFKRRE |
9 | 5xfmA | 0.18 | 0.17 | 0.94 | 0.69 | CNFpred | | FNTCLHPFIRNTVGSMEFGGCLLNKRLNDGGTTRRTTDVFQLATTVLLQNPVQNFALAPNNLKDVCMDFMKR-VPTTW-DETRFVDGYPGKYVVLARRDTWYLAAVNEPLKLKLDLEMAGKTVALYKDEPELTSLKVKENGKVQLEIRQGGILCIK------- |
10 | 5n1aA | 0.09 | 0.08 | 0.88 | 0.83 | DEthreader | | KYLQKNIQVRWNPQEVIIGVDGLVSIIWCFGTVGKTSNSTIIVWASGDVCLSISGKAVVSGPIVTLPHLPQHP---------TVLSAPKAYILSWWNSHISASISEDGTLLAASTPT------DVKVVNTGTGWAEE-----GSKVIPHKLHRRVDLAPVVLK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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