Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | RWLHLKQYQLEVTFCVYIFTPWEKFAFYTILFLLSSLTFIATVLYLPQHIAFI |
1 | 4pf6A | 0.08 | 0.08 | 0.98 | 1.17 | DEthreader | | PDP-FKKVEKFSKAVWDGLSPEQQEIVQTAADAAAQSGREKQLAKEQELVSFL |
2 | 3dl8C | 0.03 | 0.02 | 0.66 | 1.21 | SPARKS-K | | ------------------KATISVIIFSLAIGVYLWILDLTFTKIISFILSLR |
3 | 6tdxG | 0.12 | 0.11 | 0.91 | 1.33 | DEthreader | | --I-LQ--SLPMKTALGELEETAVEDFYNFHSCLAVLNAVSENELSEYAARIV |
4 | 6ly5D | 0.08 | 0.08 | 0.98 | 1.17 | DEthreader | | MSGREGNFGFD-PLGLKGKSEAEVNEMKLKEIKNGRLAMLAFSGVVTQAVLTQ |
5 | 6f5dG | 0.09 | 0.08 | 0.89 | 1.33 | DEthreader | | ----KN--RYLFANALQNEEEQLIRDFFDFHAALAVLNAVGENELSEQAARLV |
6 | 1p49A1 | 0.00 | 0.00 | 0.36 | 0.70 | DisCoVER | | ---------GVTLLTLAALNCLGLLHVP------------------------- |
7 | 1st6A | 0.06 | 0.06 | 0.94 | 1.17 | DEthreader | | -AGA-LRGG-SGKATMGTISDEESEQATEMLVHNAQNLMQSVKETVREAEAAS |
8 | 2nuuD | 0.02 | 0.02 | 1.00 | 0.49 | CEthreader | | GTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGWIFGEWALRGKP |
9 | 6etxH | 0.08 | 0.08 | 1.00 | 0.50 | EigenThreader | | KNCGGSQAAGYLQRLLQLKYPGHLAAIRIRAPMLVQNEMRDAWYGARDWALNH |
10 | 3jc8Oa | 0.10 | 0.08 | 0.77 | 0.23 | HHpred | | ----------KYLDQFVKAPPAIKFGGLAFVVGALTAA-NFFMVIQPTEEEI- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|