>PF11765 (323 residues) FALEISTNTVDRGTISLNVGDVTVDSGASWSIINNAVSAFVGSLDVQSNAGLYITSTSPL IALQVTLTSLLNTITNDGTIVFDSRDSLTASTYNLVGATFTNTGDMFLAASGIVPSTMSV TAANWDNSGLMVFSQNQRSSGVVNLGAVGGSITNDGQICLENEVYQQTTSINGAGCITAD QDSTIYISNSLLPVANTQNFYLADSQSSIVAQALSTPQTFNVYGFGNGNMVGITLPLTAS VLPPNPAYSYNAATGILTLRNLLVTQNFNIGTGYDPSLFSIVTDSGAGLPSTLLGSVTYS GPVPAQTLPASCQIVCQPIPDTP |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 300 320 | | | | | | | | | | | | | | | | | |||||||||||||
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Seq | FALEISTNTVDRGTISLNVGDVTVDSGASWSIINNAVSAFVGSLDVQSNAGLYITSTSPLIALQVTLTSLLNTITNDGTIVFDSRDSLTASTYNLVGATFTNTGDMFLAASGIVPSTMSVTAANWDNSGLMVFSQNQRSSGVVNLGAVGGSITNDGQICLENEVYQQTTSINGAGCITADQDSTIYISNSLLPVANTQNFYLADSQSSIVAQALSTPQTFNVYGFGNGNMVGITLPLTASVLPPNPAYSYNAATGILTLRNLLVTQNFNIGTGYDPSLFSIVTDSGAGLPSTLLGSVTYSGPVPAQTLPASCQIVCQPIPDTP | |||||||||||||||||||
1 | 6qpsA | 0.06 | 0.05 | 0.90 | 1.17 | DEthreader | NLDAVVLKDTYHNLKEINFTGIVWRENPGAVISGK-LRLKIYGYLQL--EDLLFYKAW-IGHDMIDFQGVYASFCRMTRCVIDECNDGGDEYWGLRGTNNRI-DHCYFANKRV-GGLVLQVWNNHLIDHNFFGERQPYGNAEIIRIGLESRTIVEDNVFFRSGEISVKSHNVLRRNLFYESAGGLVCRHGHYNVI-ESNTFIGHNLTAGIRIINQGHTVYDNYIKDVRSFGLLVRVGVYE---------IAY-TFLLELGMPRNVRFAHNLF-AGQTPDLKIVR--------------AFSMPLNQEERIDACIFVGKALEN- | |||||||||||||
2 | 6k0mA | 0.08 | 0.07 | 0.85 | 1.05 | EigenThreader | KKGIYIPAGEWTINSKIFRATEVGAGPWYTKLVATDVGFNISSTIRD----LSAWGNYINRGKFIDGNGMQNVTVQ--NIWVEHFV----CLYWGVNSSYNTFKNNRIKN--TFADGINMTNGSNVIDNNYARG--TGDDSFALFSATGSYNYTNLTATNVAAFAVYGGSDNLFQNLYGADPGITISSYSTLGFGDQDTVILDRTYAIWIYGGDRAIKNILIKNVPVYFGLMFQS-M----SPNNMVMNINNPSRYGIKLVAYGGAVKVNNPGI----SAIYG------EAQSPNFTVSGNNW-------------------- | |||||||||||||
3 | 5ny0A | 0.13 | 0.10 | 0.76 | 1.91 | CNFpred | ----------------------------TIKLTD--NITLTSAIELTNSRDVTIYGN----GKYINATDG------NGGIFIHNTK-SYTVNLTIEKATLYNQSQGFVHMND--EGTDNITYKNITAYGGTLVWSQTVGTKTLSLEG-TVNFYSVPSYTVGGQTYSTTPAIYVSNEINIADNANIALENS----ATKIDIWMIADTTALTIGN---NATLTMENG-NNSALNIKLDGSNSFTVGGSTVKLSAKVDNVRILPDSNTANVSFAK---GSDVTLHAGTGSNLRM-ISNQIDFNG---------------------- | |||||||||||||
4 | 5z9tA | 0.08 | 0.08 | 0.92 | 1.17 | DEthreader | NLEVVIPNGKYANLGQVTIAVTIRAEQAAAWLTGLIQFELKGDITLD---GLVFTEGGPNERFGAVRMMGNGNTLQ-NSTFYYFNHDTYPYLWVSLGKDGKVINNRFEGKQ--KRGTLIGVKDNHLIANNIFMDQKPNGNSWEIRIGDSSSKFVNNLMIMDGEEISIKGDNTISGNTIFQSAALISLRHGKGNTVENNMILGNKRLTGGIRIYDEDHVIRNYIANTRGRRGVINTGIIDVANG-----------------TPKNITIENNSLVDTEWGIVYGNQSHREVEGIYAG---NEFVSV-NGLVLSVVTAAGVLETTK | |||||||||||||
5 | 5z9tA | 0.09 | 0.08 | 0.91 | 1.17 | DEthreader | KDEVVIPNGKYANLGQVTITAVTIREQAGAWLTGL-IQFELKGDITL--DGLVFTEGG-PNERGAVRMMGN-GNTLQNSTFYYFNHYTYPYLWSLWGKDGKVINNRFEGKQ-K-RGTLIGVKDNHLIANNIFMDQKPNGNWEAIRIGWDSSSKFVNNLMIMDGELSIKSDNTISGNTIFQSAALISLRHGKGNTV-ENNMILGNERTGGIRIYDEDHVIRNNYIANTRGGGVINTGIIDVAN------------------TPKNITIENNSLVDTEWGIVYGNQSHRSLEVIYAG--VDNSQTVVGLVLSVVTAEAGVLETTK | |||||||||||||
6 | 5ny0A | 0.09 | 0.07 | 0.77 | 1.03 | EigenThreader | VHTIKLTDNITLTSAILTNVSRDVTIYGKYINATDGGIFIHNYTVNLTIEKATLYNQSQYGF--VHMNDEGTDNITYKNITAYGG-----TLVWSQTKTLSLEGTVNFYSVPIGDTTPAIYVSNEINIAIALENS---ATKIDIWMIGIHPLTIGNLTMENSALNILDGDTTVGSTVKLSAKVDNVRILPYEDSNKGSDVTLHATGSNLRMGAS---ISNQIDFNGYYWNDQQKTG----------------STGVANFN-----------PGS---NVLFQAGPG--------ASNVNTY---------------------- | |||||||||||||
7 | 2odlA | 0.15 | 0.12 | 0.85 | 1.86 | CNFpred | ----AVFNRVTSNQISQLKGILDSN--GQVFLINPNGITIGKDAIINT-NGFTASTLDI-RNFTFEQTKALAEIVNHGLITVGK-----DGSVNLIGGKVKNEGVISVN-----GGSISLLA-----GQKITISDIINPTITYSIAAPENEAVNLGDIFAKGGNINVRATIRNQGKLSADSSGNIVLSAKEGEAEIGGVISAQNKGGKLMITGDKV-AVIDLSGKE-GGETYLGGDERGEGIQLAKKTSLEK-GSTINVSGKEKGGRAIVWGDIALIDGNINAQGSGDIA-KTGGFVETSG---------------------- | |||||||||||||
8 | 6qpsA | 0.06 | 0.05 | 0.89 | 1.17 | DEthreader | SGLAVVLKDTYHNLKEINFTGIVWRAENPAVISGKLRLKIYGEYLQL--EDLLFYKAWAIGHDMIDFQGVYASFCRMTRCVIDECNDPKDEYWVGLRTNNRI-DHCYFANKR-VGGLVQVWLNNHLIDHNFFGERQPYGGAEIIRIGLESRTIVEDNVFFCSGEISVKSHNVLRRNLFYESAGGLVCRHGHYNVI-ESNTFIGHNRTAGIRIINQGHTVYDNYIKDVRSFLLVRVGVYE------E---IA-YNTFLELGMPRNVRFAHNLF-AGQTPDLKIVR----------------FSMLNEEKEIDACIFVGHKAL-- | |||||||||||||
9 | 1dboA | 0.12 | 0.11 | 0.90 | 1.17 | DEthreader | EVLVQIADGTYKDVQLIVSNSITIKALNPVFFTGDAKVELRGEHLIL--EGIWFKDGNRAIAWGLVAIYGS-YNRI-TACVFDCFDE-ANSAYITTPQHCRI-DHCSFTDKITFDQVINLNNMYHRV-DHCFFSNPQKPAGGGIRIGDIGRCLVDSNLFMQDSEITSKSENVYYGNTYLNCQGTMNFRHGDHQVA-INNFYIGNQGYGGMFVWGSRHVIACNYFELSETAALYLNPGAMAS------------------LA-FDMLIANNAFINVNGYAIHNPLERR--YCFETP--FFKDKY-ITGKPLSWDEVRKEMPGTL | |||||||||||||
10 | 4nk6A | 0.08 | 0.07 | 0.83 | 1.03 | EigenThreader | KQFEVSPGVYVARLPILVE--TEIDSTKELRLSQEGSFIVSEGMLITN-TSVNAWSETRNGLAPFVLTWGGSQTWIATKMAS-MGYNQSSYGVSISQPTGWIIDSEFAD----MWYGFYCYETRDFVVGNTYRD----NIVYGIDPRSHGLIIAENDVYGTHGIIISRNSFIFRN-SHNNLSGVVLDRNSVGNIVAYNEIYQNHTDGITLYESG--NNLLWGVIANRRHGIRVRNS--------VNIKLAMANGLMGVYGHIVSLIMVGLSSNGS---GPLSID----SPLSVEVSMLM------------------------ | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |