Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | GDSINPSYVYKNTNVSDPDEGNMYTSTEGNTEAVNVFYYDPTVERILTCDCVRPVYTIYTDDPDSSFDIIKNNNGTFTFVESSSGEIQTLHVSQYGALWITSPEYDGETGGMDDVGFRADDVILVA |
1 | 6ne9B1 | 0.11 | 0.07 | 0.64 | 0.64 | DisCoVER | | ----TVEDF------------------------KPSEVNQPGK-LYPQVNSERKVRVQISAPEAKVV----------QLDL--GGVKYDLTKDEKGVWTGESAPQQYYQLNVDPDPGTGIEV---- |
2 | 4fbrA | 0.07 | 0.06 | 0.79 | 0.83 | DEthreader | | ----------AYLLWLIKGTLS-S------------ANNVWVDTYSVENQWWHGVWVLGTRGQNVINVDAKSNDGTLSGTMTEGPIGFRGTLTSPDTMIGVVALNVASSDGGK-TL-AGTMIYNG- |
3 | 2z2oC | 0.11 | 0.11 | 1.00 | 0.46 | CEthreader | | NPDSAPYGITEGPNGDIWFTEMNGNRLPNKGSYPSFITLGSDNALWFTENQNNAIGRITESPASGPVGITKGNDDALWFVEIIGNKPHAITAGAGIDLWFTEWGANKEEYPIQIKSAEPHGICFDG |
4 | 4fj6A2 | 0.11 | 0.11 | 0.99 | 0.63 | EigenThreader | | NGTLLGVYDIRYNSSVDLQEKVATFKLPHGQNGVGDPSILKTNTIWVVAAWTQGPGRGITQDGTLVFPQFIDATRVPNAGIYSGKDLLLFSNPNTTHITIKA-SLDGGLTWPTEHQVLLDESCLSI |
5 | 3ottA4 | 0.15 | 0.11 | 0.74 | 0.47 | HHpred | | --------------LEDTTRQCVWIGTEG-----YLFQYFPSTGQIKEAFHNNSIKSLALDGNGDLLYVYHNDTTPLQHIIHTNNIIWNIFADQEHNIWLGTD--YG-ISLSRYN----------- |
6 | 3v9fA | 0.09 | 0.06 | 0.60 | 0.42 | MRFsearch | | ----------------------LWIGTD----GGGINVFENGKRVAIYNLLSNSVLCSLKDSEGNNISYYNTRLKKFQIIELELLDVRVFYEDKNKKIWIGT------------------------ |
7 | 5gyyA2 | 0.10 | 0.09 | 0.86 | 0.44 | FFAS-3D | | -DTLLPEMLGYDLKTGLNRFLVSWRSSDDPSSGDFSYKLDIQLPEFYTFKDNTLVHRTGPWNGIRFYNFTENSEEAYTFLVTNNSIYSRLTINFSGFFERLT--WTPSLVI--------------- |
8 | 6zu9l1 | 0.14 | 0.14 | 0.99 | 0.68 | SPARKS-K | | GHERPLTQVKYNKEGDYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVS-NGQCVATWKSPVPVKRVEFSPCGNYFLAILDNPGSINIYEIERDSATHELTKVSEEPIHKIITH |
9 | 6fb3A | 0.10 | 0.09 | 0.85 | 0.79 | CNFpred | | ----NASVIFDYSD------GRILKTSFLGTGRQVFYKYGKL-SKLSEIVYDSTAVTFGYDETGVLKMVNLQSGFSCTIRYRKIPLVDKQIYRFMVNARFDYTYHD--------NSFRIASIKPII |
10 | 2fkjA | 0.04 | 0.03 | 0.71 | 0.83 | DEthreader | | ----------TKS-STEELSEKKITRA-----DKSSTEEKFNVSEKIITRADTRLEKEV--G-YVLEGTLT---AEKTTLVVKTLSKNISK-------SGEVSVTSTLTKDLVFTENT-------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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