Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40
| | |
| Seq | GTILLIVLILMLIGAFPSWPHSRNWGYAPSGGLGLVVIILIILLLMGRL |
1 | 6xz4A | 0.15 | 0.14 | 0.98 | 1.17 | DEthreader | | LSGLSRNLKFLTDAALASDSRD-RFREQFKLGVKCMSTSASALLACVCS |
2 | 3dl8G2 | 0.10 | 0.10 | 1.00 | 1.49 | SPARKS-K | | AQALLLIPSTLLNFVQNPFIKVIADMFQPGAIFYNFLYVTFIVFFTYFY |
3 | 2i0mA | 0.08 | 0.08 | 0.98 | 1.17 | DEthreader | | RISIMSSCSDLERMGDHMAAAVYIIG-HRFADYIANICERLVYLETGEL |
4 | 6xz4A1 | 0.15 | 0.14 | 0.98 | 1.17 | DEthreader | | LSGLSRNLKFLTDAALASDSRD-RFREQFKLGVKCMSTSASALLACVCS |
5 | 3dl8E | 0.14 | 0.14 | 1.00 | 1.22 | SPARKS-K | | IAVVLIISTLLQKGRGQSIFGVGGVETILTKATYWLGALFLVLALLLSV |
6 | 3iqcA | 0.08 | 0.08 | 0.98 | 1.17 | DEthreader | | AYINRVTDIFTELLNIL-DYEKGGEVAVLTGLYTHQIKVLTQANVENDA |
7 | 2ksdA | 0.04 | 0.02 | 0.47 | 0.58 | DisCoVER | | -------M--K---LGLSMLLALVVEQLEESRQ--RL------------ |
8 | 5ic0A2 | 0.08 | 0.08 | 0.98 | 1.17 | DEthreader | | EVQMAQYFEPLTLAVGAAKTLSH-PQMALLDQTKTLAESALQLLYTALV |
9 | 3mktA | 0.16 | 0.16 | 1.00 | 0.57 | CEthreader | | ISYWVLGLPTGYILGMTNWLTEQPLGAKGFWLGFIIGLSAAALMLGQRL |
10 | 5araW | 0.18 | 0.18 | 1.00 | 0.47 | EigenThreader | | VIIETISIHLIGGATLALMSISTTTALITFTILILLTTLLVSLYLHDNT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|