>PF11739 (193 residues) TDPEGQLTLWQDKNNPSLVSLSEFSAGLMGGSVSIDKVDYDMGKQTAETVLVLDSIPLQK LLDLQGMKKIFATGTVAGKIPLIMKDQKFEIPAGKMDALQNGQIIYTTTPEERVAANESM RITYEALSNFLYSELISSITMAPDGQSLIRLQLKGTNPSFQEGRPVHLNLSVEQNLLDLF RSLSISTNIEEAI |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | TDPEGQLTLWQDKNNPSLVSLSEFSAGLMGGSVSIDKVDYDMGKQTAETVLVLDSIPLQKLLDLQGMKKIFATGTVAGKIPLIMKDQKFEIPAGKMDALQNGQIIYTTTPEERVAANESMRITYEALSNFLYSELISSITMAPDGQSLIRLQLKGTNPSFQEGRPVHLNLSVEQNLLDLFRSLSISTNIEEAI | |||||||||||||||||||
1 | 6z34A | 0.05 | 0.04 | 0.86 | 1.00 | DEthreader | -NLVGVGIGALTMQE-GMHLGLGMDIITANYVAPELSLVWRGEYALGVGAFASD-GVGT----------LENYSRLIVLRIPFSAAGASLDAVWTSVN---LGLLLDTQIGTLVGQGQ-VSGSLMLAGYLSAGGVDSWGIGGRNFKTHVGLSGNADLTAVIPLSGELKLHNFEMPASVW-NV-S-G------- | |||||||||||||
2 | 3lycA | 0.08 | 0.05 | 0.65 | 1.01 | CNFpred | AAGSTHVNINSPL-EEFEAGLAGSGIIQFHDTASFTNLKIEI---AGSGDFVGHKVYCE---------ELNGDMAGSNTIVLGG-----TVGIAEFSIAGSGTVRAF---------------------DCTMDELECKIAG----SGDIEAFVVNK---------IKAEIAGSGSVKY--------------- | |||||||||||||
3 | 6z34A | 0.05 | 0.04 | 0.89 | 1.00 | DEthreader | NLVGGPVIGA----MQEGMHLGLGMDITANYVAPELSLVWRGRYALGVGAFASD-G-V-G--T------ENYS-RLIVLRIPFSAAGASLDAVWTSVN---LGLLLDQIGTLVGQGQVSGSLM-L-AGYLSAAGGVDSWGIGGRFKTHVDLSGNADLTAVNIPLSGELKLHNFEMPASRVYWDTNVYAQPTTK | |||||||||||||
4 | 3bryA | 0.06 | 0.05 | 0.88 | 1.00 | DEthreader | --EFGPV-GP-----GEGRHFSLGLDVVSPYFAPQTAFVYRQRYAFGAGIFAEG-GLGTQ--------L-DQFSRLLVLRVPFSAAVGASVDAVWTSL---NLGTLLDVSIGTLAGQG-RVSG-VLGGYIDFSGVQAWGIGGRYAKTHVGLTGQATLSAVIPLKGDVTVRNQMPAQLRVFDISVFGHYATSLL | |||||||||||||
5 | 6mitC | 0.05 | 0.04 | 0.72 | 0.87 | DisCoVER | TYKSDHSDTVVYSPEALNYRLIAQHVEYISWFTQPVMTTFDKDKVPTWSIKSDRAKLT--N--------DRMLYLYGHVEVNALTAD-SQLRKITTDNA--QINLV---------------------TQDVTSQDLVTLYGT---TFNSSGLRMRGNL-RSKNAELIEKVRTSYENK---------------- | |||||||||||||
6 | 3bs0A | 0.07 | 0.06 | 0.83 | 1.00 | DEthreader | -LEGYGATGNLAPDG--NQFELGLDVVTTDPYVGPQLSYVAQLWRFGAGLFVSSGLGTE-----------DNSSRLIVLRAPIGFSGASV-DLVWTSLN--LELLLQVATAQGN-----LSGGLVL-AHFSLSAVDAVGWGGRNFKTSVDLEGKATLSAILPLDGDIRVKNFEMPASAW-TV-S-G------- | |||||||||||||
7 | 4k3bA3 | 0.07 | 0.07 | 0.94 | 0.70 | CEthreader | GLVMSAGVSQDNLFGTGKSAALRASRSKTTLNGSLSFTDPYFTADGVSLGYDIYGKAFDPRKASTSVKQYKTTTAGGGVRMGIPVTEYDRVNFGLAAEHLTVNTYNKAPKRYADFIRKYG-----------KTDGADGSFKGLLYKGTVGWGRNKTDSASWPTRGYLTGVNAEIALPGSKLQYYSATHNQTWF | |||||||||||||
8 | 4d51A | 0.06 | 0.05 | 0.76 | 0.73 | EigenThreader | Q---WNREQKEPG-----YYENEDGIKQLGEYTRSKVYSWNNDYN---MGFYSNLENA---------WGKRQEGYSALFKPYKRFGNW--EVGVEFYYQIKTNDEKQPD-------GT-------INEKSDFNERYIEPIVQDDAGTTRVRVGKNETDRSGGGNAGIIRKATVGY-----------EQSIGES | |||||||||||||
9 | 5vtgA | 0.09 | 0.05 | 0.60 | 0.23 | HHpred | -------------------------LFTLDGRVDVPWARIVVHDINSNLIVHVGN--------NVRIDAFGLKARLTGDLNVVQDKQGLG-LNGQINIPE-GRFHAYGQ-------------------DLIVRKLNIEAIRNPEDDVIAGVRVTGLADE-----P-KAEIFSDPAM----------------- | |||||||||||||
10 | 5vtgA | 0.13 | 0.08 | 0.62 | 0.73 | MRFsearch | -----------------LFTLD--------GRVDVPWARIVVH-DPINSNLIVHVGNNVRIDA------FGLKARLTGDLNVVQDNGQINIPEGRFHAVRKGELLFSGPP--------------------DQPYLNIEAIRNPEDDVIAGVRVTGLAD------EPKAEIFSDPAML---------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |