>PF11737 (238 residues) QEELDQLLAPIALYPDSLVAQILMASTYPLEVVQAERWAKQNESLSGDALTAALEKENWD PSVKSLVNFPQVLQMMNEKVDWTQKLGDAFLAQQKDVMDTIQNLRKKAQAEGNLKTNQEQ KVIVEKKTQTIIIEPSNPQVVYVPTYNPTVVYGTWWYPAYPPYYYYPPGYVAGATLFSFG VGIAIGAAWGYAWGGCNWGRGDVNINVNRNTNINTKIDRSKYANKVSTGEGGKGSWKH |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 | | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | QEELDQLLAPIALYPDSLVAQILMASTYPLEVVQAERWAKQNESLSGDALTAALEKENWDPSVKSLVNFPQVLQMMNEKVDWTQKLGDAFLAQQKDVMDTIQNLRKKAQAEGNLKTNQEQKVIVEKKTQTIIIEPSNPQVVYVPTYNPTVVYGTWWYPAYPPYYYYPPGYVAGATLFSFGVGIAIGAAWGYAWGGCNWGRGDVNINVNRNTNINTKIDRSKYANKVSTGEGGKGSWKH | |||||||||||||||||||
1 | 3bgdA | 0.07 | 0.05 | 0.69 | 0.65 | DisCoVER | QKNQVLTLWKKWVI-FLKGQSGLR-VFFPL----------------C-------------KAIEMKWFADRG-------------HT-VVG--------V---E--IS--EIGIFFALSYTEEPLAEIGAKVFKSSSGSISLYC------CSIFDLPG-KFDRIWDRGALVAINPGDHDRYADIILSLLR------KEFQYLVAVLSGPPFYVFCSMQCLEEVDALDYLFEKLYLLT- | |||||||||||||
2 | 5jouA | 0.05 | 0.04 | 0.77 | 0.67 | DEthreader | ---IVV------FQYNTKVSVP--FVVSNYGIL-----------NPNDYLTPVNPEEQGK--Q---S-WWSE-MT-QLDYY-FMADDVISGYR---S--------SVWPWMDAENRDCTDRLCGPTALGSST-------EFFNAYALMAEAYLSTA----IGLFTMWFGAFVPLYRARIATDYTIMRPLVMDFTDVNDIGDQFMFGPSFMVSPVYREIYFWYDFGFQAERKVIEPY-- | |||||||||||||
3 | 3mkqA | 0.06 | 0.06 | 1.00 | 0.48 | CEthreader | VVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVSCVATLEGHMSNVSFAVFHPPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQ | |||||||||||||
4 | 2inrA | 0.09 | 0.08 | 0.88 | 0.63 | EigenThreader | ---------ALPDVRD----------GLKPVQRRILYAMYSSGNTHDAKTVGDVIGQYHPSSVYEAMVRLEELLVLPSRFPNLLVNGAEVIQATLKYIDNNQLMGIKKAYESGKGRIIVRSVEEETRKQLIITEIPYEVIAIELEKNSDLKLMGIRQIIDSYLNH---------QIEVVANRTKFELDNAEKRMHIVEGLIKALSILDKVIELIRSSKNKRDAKENLIEVYEFTEEQA | |||||||||||||
5 | 1ezfB1 | 0.10 | 0.04 | 0.39 | 0.23 | HHpred | -----SFAAVIQALDGEMRNAVCIVLRALDTLEDDMTI----SVEKLHNFHSFLYQPDWEKDRQVLEDFPTISLEFRNLAEKYQTVIADICRRMGIGMAEFLD--------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 3a7mB | 0.09 | 0.04 | 0.42 | 0.40 | MRFsearch | --------------TVEFINRWQRIALLSQSLLELAQRGLLQQEVSYLQSIETVEKQTPPGITRSIQDVAGYIKQTLDNEQLLKGLLQQRLDELSSLIGQSTRQKSLNNAYGRLS--------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 5dztA1 | 0.11 | 0.10 | 0.90 | 0.47 | FFAS-3D | -LFLLDLNSELNICTKEFIINLLEILT--QELIHTSKTLVLDLHRFIYYLKKRFNSKK--DIIAFYTCYPELMRIT------VVRM-RYFLDNTKQMLIRVTEDLPSIQNCFNIQSSELNSISESRGKTVSTLTSDGKKIVYKPKINVKKVYF-------YEEYIDNIEINNIEEVKKYYERYGKLIGIAFLFNVTDLHYENIIIDNETFFQQNIPIEFGNSATVDAKYKYLDS---- | |||||||||||||
8 | 4k0dA | 0.13 | 0.07 | 0.57 | 0.71 | SPARKS-K | AASADAQLELI----GPRAAAAASLESAVLHVSLTARAYALTPE----------PAR--DALQAALRRLEGAAARFAAKSPEGAALSGRILAAVPPFEKAAVALGTAVATGGAIRAREATLPPREELLSLLRTFGALQQAHDAGASHTILA--------------------------------------------------------------------------------------- | |||||||||||||
9 | 2y52A | 0.10 | 0.06 | 0.65 | 0.65 | CNFpred | ------------------LARAFSFAR----EDGGAALRALTYAQRAARLA---------DIVKLLQARGDYYAIATANSGTTRNDSAVDIDG---GIFTLSYYAKLGASLGEVHALRDGSAESLSDRSFSAQH------VLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATAWLTQRMVADVV-------------------------------------------- | |||||||||||||
10 | 6z2wE | 0.05 | 0.04 | 0.80 | 0.83 | DEthreader | SHSE-------------------KNSVTKSDSENANMILCSLREFQLQDNILGIFVFDERVINGISFLIIYA-------------YE--R---FNGKLRNIVYSILDTLIKEKSILKLKPYTLVGKPELGI--IFANNLSVINQDD---L-SAKDKFEYKSNTTIL--YRMERIGAD-IRKRSLGTRSYAVMILVLHVDLDCFRLTLLGTEK-EAGQTETLIQEATSEDNLSMIGWL- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |