>PF11727 (280 residues) HILLVFSAVASASEESYKIDRYKADRKLDKEGAIALCKLRDVLTNISEETTDYLVEEVQK MGESLKMDMDAINYYVKRVRSLKESGREDAKINESDSNEIDSLCKEAKAHANKKSRDQVD QTVAKIRRVSGIVKDAATKTLGDENELEDHDNADGIFKVFNWHCGGDRIGEVHAGSQSCD VIGFRKNFSAGQRNVISCKKWKDEYGETIPHENVTVTQMESYLSRWFEARPKRVGEDICK DGEYHSPHSCTVWEGWVTGYEETMEKMEELRNNIKKLNRI |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 280 | | | | | | | | | | | | | | | |||||||||||||
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Seq | HILLVFSAVASASEESYKIDRYKADRKLDKEGAIALCKLRDVLTNISEETTDYLVEEVQKMGESLKMDMDAINYYVKRVRSLKESGREDAKINESDSNEIDSLCKEAKAHANKKSRDQVDQTVAKIRRVSGIVKDAATKTLGDENELEDHDNADGIFKVFNWHCGGDRIGEVHAGSQSCDVIGFRKNFSAGQRNVISCKKWKDEYGETIPHENVTVTQMESYLSRWFEARPKRVGEDICKDGEYHSPHSCTVWEGWVTGYEETMEKMEELRNNIKKLNRI | |||||||||||||||||||
1 | 4e40A | 0.08 | 0.06 | 0.72 | 0.81 | DisCoVER | --------------EIKVELEDSDVAAACELRAQLAGVSIASGILL-RPAVIRN-ATTEFSRKKSEDILAKGGAAVERASAAVDRVSGLDKTTAQKVRKAAAVAHHALEHVKEEVEIVA-KKVNEIIELTGATEHAKGAKA-------------NGDASAVKVLAAKESENQYVKEAAECS--------------ESTNYD------------VTAKS---LAAAL--D---------------KLPGVKAVKTTFQSILTSLDNLDKDVKSVEQRALE- | |||||||||||||
2 | 6elcA | 0.12 | 0.07 | 0.61 | 0.67 | DEthreader | ---------------------NPDD-N-KE-DFAVLCALAALANLQT--TV--PSID--------------------------------------------------------------------TPTAIAKALNKAVYGQDAVYNSADCFNKATVAATIVCVCHK--KNGGNDAANACGLINHQSDAGATASDFIITCAAR--------KPLTYLDSALAAVSARIRFYGKFKATGCTGSASEG--L-CVEYLNFYIPVKEISNVAEALKRTEKDAAES | |||||||||||||
3 | 6xz6A | 0.13 | 0.09 | 0.69 | 0.87 | CEthreader | ----------------------NDNLEAELEQTKALCEVAKQLRKL-PLLTEERRFEAVGALEESKKAAKEGKKAAKRAEAGAVGGT--------SEQQQAAKRAREAATVAYEASVRAEAAAMEVKRFARALDSFESEYE------------SVFSGLLRGAAEHGGNETIKQLAKECA---------------------------TAVADDVTPEALTRAAHNLRGLYMQDF------------------AEEYLQEANEAANKLEELQKATAETVRA | |||||||||||||
4 | 4e40A | 0.10 | 0.07 | 0.74 | 0.87 | EigenThreader | -----------------GEIKVELEDSDDVAAACELRAQLAGVSIASGILLRPAVIRNATTEFSRKKSEDILAKGGAAVERASAAVDRVSGLDKKAAAVAHHALEHVKEEVE-IVAKKVNEIIELTAGATEHAKGAKANGDA------------SAVKVSNLLARAKESENQYVKEAAEE-------------------------CSESTNYDVTAKSLAAALDKLPGVKEDN-----------------AVKTTFQSILTSLDNLDKDVKSVEQRAEEL | |||||||||||||
5 | 5vtlA | 0.11 | 0.07 | 0.67 | 0.51 | HHpred | --------------------------QNTVSHVSAACLFSEALHGIPF-GVKVLKALAAANVSDASKAREGCQDAVRRAEDAFSSTP-KV--EEA-VGRA----RAALKEAESA-ENAAKTALSDVEQYAANAPLLAAGKTA--------PIDDYLKSVAED--------------NSAAS-TARR-------IARGCSLP---------NRGVNSWVLKKAVEFGCEFFTGDI------------------CKILTDGMADLRAEYDQLEAAVRRASEA | |||||||||||||
6 | 2y44A | 0.13 | 0.08 | 0.61 | 0.53 | MRFsearch | ------------------------------EEVQTMCDVARQLRAL-ETASQSAVAAVVSSAREASEAKERAEKAVERAKSKKRG----VDTATEAAARAAAAAQRAETVVSRKHAADLTAASKDAIETTDESLRLLATE------------ADEPIRTAAKKCTGAA-------------------------------------------AEVTSKSLESAFDALAELLPD-------------------GADDIREHGAVFVKGLKSLEDDVRTAGEA | |||||||||||||
7 | 6elcA | 0.13 | 0.11 | 0.86 | 0.96 | FFAS-3D | ----------------------------NKEDFAVLCALAALANLIDTSGLAAYDNLQQLNLPTWRKQWPIWVTAAAALEAAVLARAGLTNAPEELRNRARLALIPLLAQA-EQIRDRLSEIQKQNEDTPTAIAKALNKAVGQDKETGQASKATTVAATIVCVCH--KKNGGNDAANACGRLINHQSDAGANLATASC--------AARPPKPLTAAYLDSALAAVSARIRFKNGFKATGCTGSASEGLCVEYTPWVKEISNVAEALKRTEKDAAESTLL | |||||||||||||
8 | 4e40A | 0.13 | 0.10 | 0.77 | 0.78 | SPARKS-K | ---------------------GEIKVELDSDDVAAACELRAQLAGVSLRPAVIRNATTEFSRKKSEDILAKGGAAVERASAAVDRVSGLDKTNE------TAQKVRKAAAVAHHALEHVKEEVEIVAKKVNEIIELTAGATEHAKGAKANASAVKVSNLLARAKESE-NQYVKEAAEEC---------------------------SESTNYDVTAKSLAAALDGVKED----------NAVKTTFQSILTSLDNLDKDVKSVEQRAEELETALEKAERQ | |||||||||||||
9 | 6xz6A | 0.14 | 0.09 | 0.66 | 0.85 | CNFpred | ------------------------------EQTKALCEVAKQLRKLP-LLTEERRFEAVGALEESKKAAKEGKKAAKRAEAGAVG-------GTSEQQQAAKRAREAATVA-YEASVRAEAAAMEVKRFARALDSFESEYE------------SVFSGLLRGAAEHGGNETIKQLAKECATAV---------------------------ADDVTPEALTRAAHNLRGLYMQD------------------FAEEYLQEANEAANKLEELQKATAETVRA | |||||||||||||
10 | 4e40A | 0.09 | 0.06 | 0.69 | 0.83 | DEthreader | -----------------------VELEDVAAACELRAQLAGVSIASG-ILLRPAVIRNATTEFSRKKSEDILAKGGAAVERASAAVDRVAVRK--AV-HHALEHVKEEVEIVAKKVNEIIELTAGATEHAKGAKANGDASA-----------V-KVSNLLARAKESE-N----QYVKE-AA-EE-C-------SESTN------------Y-DVTAKSLAAALDKLP--GV-------------------KEDNAVKTTFQSILTSLDNLDKDVKSVEQR | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |