Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | LLKGANIYVPPPKPKPQPTAEYTALMARLRREEENIAYQRMINPTTSIPEPARINKEDEDDEVTFTDVNRQLALIINVLVSIIACSVAIWIAARHWSVPQRMALSMFGSGTVAIAEVAIYMGYIRRIKEAK |
1 | 3qweA | 0.11 | 0.08 | 0.79 | 1.00 | DEthreader | | ------------------HMP-LQYIYTLFLEHDLSLGTLAMEAQQKRDYQPLAAKRTEIEKWRKEFKEQWMKEQKRMNEAVQALRRAQLQYVQRSE------E--YQCVREANARQQDLEIAKQRIVSHK |
2 | 3wmeA1 | 0.12 | 0.07 | 0.55 | 0.59 | DisCoVER | | -------------------------------------------LNNDVQVIQYSF-------------SKLGAVLFNLA-QCVVGIIVAFIFARGSLNLGNLLTAFFSA-ILGFMGVGQAAQVVTRGLGA- |
3 | 6hydA | 0.03 | 0.03 | 0.92 | 0.83 | DEthreader | | EELAWIGFLKKSDRASF-----KG-DMEDTS-NLDDIYFKAAKTRGEFNRYDAKIEGQSSTTTILANIAPFNHLSEFTNDYCI--MAFRRTFTA-SVISFTLPVITRYYNAMTVVLERSRIYYTNTSRGMY |
4 | 6grjG | 0.10 | 0.10 | 1.00 | 0.51 | CEthreader | | LSVIKEQATEYQRLSSDTRLVIVNLNNNLITDSSNFQGIVVNLNSKVQGDNGVLAQLNGDIDKVNAAIDGAIAGIVAGGLLVIGGAFVTAIGAVADFVTTSTPVVIGGVAVAGAGGITAGAIVLHNSLGAR |
5 | 6yslG | 0.15 | 0.15 | 1.00 | 0.68 | EigenThreader | | VSFSALANPVLFKENKQLTIEELIPMAQLARREGFLKNGLSMAVDGQSAEFIRDIMTEEVEAMEDRHQAGAAIFTQAGTYLGVLGAVIGLIAALSHMDGHAISAAFVATLLGIFTGYVFANKLKRKSKQEV |
6 | 3k07A | 0.08 | 0.07 | 0.90 | 0.40 | HHpred | | --NGEVAGGVVIL-RSGKN--AREVIAAVKDKLETLK-SSLPEGVEIVTTYDR----SQLIDRALWHVRSALVAIISLPLGLCIAFIVMHFQGLNANIMS--LGGIAIAVGAMVDAAIVMIENAHKLEEW- |
7 | 5u1dA | 0.07 | 0.05 | 0.80 | 0.32 | MRFsearch | | ---------------------YNNTMGHVHSHLQGEVFGAVLRQ-----ETEFFQQNMSRVTEDTSTLSDSLSENLSLFLWYLVRGLCLLGIMLWVSLTMVTLITLPLLFLLPKKVGKWYQLLEVQVRESL |
8 | 6tqpA | 0.12 | 0.10 | 0.82 | 0.65 | FFAS-3D | | ------------EEKKMLSCYENKLLNLIKEDCENLKYKPNLSYI------CSLLKVDDTSEENIKHIKDQIIESLEVKLAIISLISMIVEMNGYKGPMSFLIEDIALKISENSEDLINFINIKNK----- |
9 | 5owvA | 0.05 | 0.05 | 1.00 | 0.69 | SPARKS-K | | ERLIDEFKYLKNNAQKLNLSRILNIVDITTKDGINDILREIKFENIKKIEELKTNLSLKYDFLKDDFDNGFEGFKDGISKNIDSIFQSEKFALLRLKIELYELETNLDTVIFDTFKEFKMSEILNSLNING |
10 | 4u8yA | 0.11 | 0.09 | 0.80 | 0.71 | CNFpred | | FPSGLKIVYPYD-----TTPFVKISIHEVVKTLAIILVFLVMYL-------------------FLQNFRATLIPTIAVPVVLLGTFAVLAAF--GFSINTLTMFGMVLAIGLLVDNAIVVVENVERVMAEE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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