Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | LAQLNIAWMKAPLESPEMADFVANLERINALAEGSPGYVWRLQDEAGDATAIRPFGDEVLVNMSVWEDVQSLSDYVYKSAHTEMLKRRREWFERVEQAHQVLWWVPAGHRPSVTEAAERLAHLREHGATAQAFTFRH |
1 | 6m35A | 0.10 | 0.09 | 0.86 | 1.00 | DEthreader | | YVAINMVEV-RNDPK-TLELFGKVGPKVCMVTARHPGFVGFQ------N--HVQIGSLMLMQYTFWKNWKDHEEMHKQNNLFRLCLQCADQMIWG--PYEPLYEIVYANMP-VVA-FG--EHI-VKE--EKEIGVAE |
2 | 6m35A | 0.09 | 0.08 | 0.85 | 1.00 | DEthreader | | YVAINMVEV-RNDP-KTLELFGKVGPKVCMVTARHPGFVGFQ------N--HVQIGSLMLMQYTFWKNWKDHEEMHKNWNLFRLCLQCADQMI-W-GPYEPLYEIV-YANMPVVA-FG--EHI-VK---EKEIGVPQ |
3 | 4ae5A | 0.09 | 0.06 | 0.66 | 1.09 | HHsearch | | FYCAIFI----PSTEDHAYQLEKKLISVDDNFRNFGGFKSYRLLRP--------A-KGTYKIYFGFADRHAYEDFKQSDAFNDHFSALSHYF-----SYFERYLYPIK----------------------------- |
4 | 6m35A | 0.10 | 0.08 | 0.83 | 1.00 | DEthreader | | YVAINMVEVRND-PK-TLELFGKVGPKVCMVTARHPGFVGFQ------N--HVQIGSLMLMQYTFWKNWKDHEEMHKQNNLFRLCLQCADQMIW--GPYEPLYEIVYANM-VVA--FG--EHI------KEIGVSPE |
5 | 2cb2A | 0.11 | 0.09 | 0.85 | 1.00 | DEthreader | | YVAINMAELKNE-PK-TFEMFASVGPKV-MVTARHPGFVGFQ------N--HIQIGTVRVLQYTFWKDWKDHEEMHRQNYLFRLCYSCASQMIWG--PWEPIYEIIYANMP-VVA-FA--EHS-VIP--EKEIGVVE |
6 | 2cb2A | 0.10 | 0.09 | 0.85 | 1.00 | DEthreader | | YVAINMAELKNE-PK-TFEMFASVGPKV-MVTARHPGFVGFQ------N--HIQIGTVRVLQYTFWKDWKDHEEMHRNWYLFRLCYSCASQMI-W-GPWEPIYEII-YANMPVVA-FA--EHS-VI---EKEGVSGQ |
7 | 3kngA | 0.15 | 0.10 | 0.69 | 0.50 | HHpred | | -EVTFVNRFTVH--G-APAEFESVFARTAAFFARQPGFVRHTLLRE--------RDKDSYVNIAVWTDHDAFRRALAQPGFLPHATALRALSTS----EHGLFTARQTLPE-------------------------- |
8 | 1tuvA | 0.09 | 0.06 | 0.68 | 0.78 | DisCoVER | | LTVIAEIRTR--PGQHHRQAVLDQFAKIVPTVLKEEGCHGYA------PMVDCAAGPDSIVMIEQWESIAHLEAHLQTPHMKAYSEAVKGDVL-E--MNIRILQ--------------------------------- |
9 | 3qmqC | 0.05 | 0.04 | 0.68 | 0.50 | MRFsearch | | --HVTLVEINVH--EDKVDEFIEVFRQNHLGSVQEEGNLRFDVLQ-------DPEVNSRFYIYEAYKDEDAVAFHKTTPHYKTCVAKLESLMTG--PRKKRLFNGL------------------------------- |
10 | 3kngA | 0.18 | 0.12 | 0.69 | 0.67 | SPARKS-K | | VTFVNRFTVH-----GAPAEFESVFARTAAFFARQPGFVRHTLLRERD-------KDNSYVNIAVWTDHDAFRRALAQPGFLPHATALRALSTSEHGLFTARQTLPE------------------------------ |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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