Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | NFYGIDYLESQSNLNDYIKYFFIFSALIVLIVAFSLYMRHRIQTKYRDLSIITFLLLLFLLGVQYSDYTQNQNKNSQSSQMVNFVKQIAKEKGVDQEEILVNSTQLVDGTLVKIEDSYYKTTLSGDQTSYVLEEAHLMNPEITI |
1 | 2vsgA1 | 0.05 | 0.04 | 0.83 | 1.00 | DEthreader | | -LAELRKTAGVAKMKVNSDLNSFKTLELTKMKLLTFAAK-FPESKEALTLRALEAALNTDLRALRDNIANGIDRAVRATAYASEAAGALFSGIMAQGC-NVISD-----KGFP--KISP----------GLGAPDLSDT----- |
2 | 2gu1A1 | 0.10 | 0.05 | 0.50 | 0.78 | DisCoVER | | IHYMVKTLSGIFA---------------------------------------------------------------PYSILQKILSVDLDQLMIQPGEELELMMDQLSRLIYHMSVEKAIYTRENDGS-FSYDFQ------E-- |
3 | 1fbvA | 0.06 | 0.05 | 0.81 | 1.00 | DEthreader | | --------------GENEYFRVFMENLMKKTKQTISLFKEGRPRRNLTKLSLIFSHMLAELKGIFPLFQGDTFRAEFWAFFALHEVHPISSGLEA---KDYISVFEFDIF---------TRLFQ-PWSSLWNAYCGSTLCNDK- |
4 | 5doqA2 | 0.09 | 0.08 | 0.95 | 0.59 | CEthreader | | -------PAMPTKVAHVLATSYMTSAFVLASIAAWHLWKGNRHIYHRKALHLTMKTAFIFSVASALVGDLSGKFLAEYQPEKLAAAEWHFETSSHAPLILFGTLEEDNEVKYALEIPYALSILAHNHPAAVVTGLNDIPEDERP |
5 | 3l2gB | 0.01 | 0.01 | 0.94 | 0.72 | EigenThreader | | --SAIQDYFVKNRVASQLELYEKYWVTFDKCIQTGVDNPGNKFYGKKTGCVFGDEYSYECYKEFFDKCIEEIHHAERRLVEKVVSDALG----GLKGDLYYPLDWPDGRGIWHNNEKNFLVWINE-EDHIRVISMQK-GGDLKA |
6 | 5mrwB | 0.14 | 0.12 | 0.87 | 0.28 | HHpred | | ----EAVKKLQAQWRNPVMFIVWIGSLLTTCISIAMASGAMPGNALFSAAISGWLWITVLFANFAEALAEGRSKA-----QANSLKGVKKTAFALAAADKVPADQLRKGDIVLVEAGDI---IPC--DGEVIEGGASVD----- |
7 | 3jc8Na | 0.05 | 0.04 | 0.87 | 0.35 | MRFsearch | | --LPVRAVKKR-EMGRQVLVLFAVVLIGAGVANYLWYDDRQSELEAHQAGVASTKARIAELEKIIGEVKNINTRKAEVEKKLAVLDALRKGR-SGPVRMMDA-------LASATPKKVWVKTFSENNNAVSIDGSA-------- |
8 | 3jc8Oa | 0.09 | 0.09 | 0.96 | 0.57 | FFAS-3D | | -----KYLDQFVKAPPAIKFGGLAFVVGALTAANFFMVIQPTEEEIGWAERRKLDLELADKSEIAQNLNERRREMDVLEELLAQINDIGKKSGLELSSVTPGKESVGGGIKMTVSGNYHEIEMANMRRIVNVNNIKFDSAKLK- |
9 | 6w2rA1 | 0.12 | 0.09 | 0.73 | 0.77 | SPARKS-K | | -----GTTEDERRELEKVARKAIEAAREREQLQRALEIARESGTK-------TAVKLALDVALRVAQEAAKRGNKDAIDEAAEVVVRIAEESNNSDALEQALRVLEEIAKAVLKSEK--------------------------- |
10 | 4u8yA | 0.12 | 0.07 | 0.57 | 0.60 | CNFpred | | --LVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFG------FSINTLTMFGMVLAIGLLVDN----------AIVVVENVERVMAEEGLPPKEAT-------------------------------------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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