>PF11675 (247 residues) NIILSFFILAIFSNVKAATFQDANDNNPHSIAYASVAQPIVIFERRDKNHTEYLDIINNI FRDESENIKYAYQCNNHHWVITDFDIYIDNSSRSLKKKLTEKGKEGFIKGSAYFIAYIKD NIIYLISQHMHKYDFERNYYNDLKLLGKDLKTLIYDEFDNDLKQDLIKYEIGPENEKYHK MAKEFLEVLVNNSSMRFKGYFIKIREDGNYMDACKTDHIYFDININKNYAKFDYRYKYLK PEVTEFL |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 | | | | | | | | | | | | | |||||||||||||
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Seq | NIILSFFILAIFSNVKAATFQDANDNNPHSIAYASVAQPIVIFERRDKNHTEYLDIINNIFRDESENIKYAYQCNNHHWVITDFDIYIDNSSRSLKKKLTEKGKEGFIKGSAYFIAYIKDNIIYLISQHMHKYDFERNYYNDLKLLGKDLKTLIYDEFDNDLKQDLIKYEIGPENEKYHKMAKEFLEVLVNNSSMRFKGYFIKIREDGNYMDACKTDHIYFDININKNYAKFDYRYKYLKPEVTEFL | |||||||||||||||||||
1 | 6wj8A | 0.07 | 0.05 | 0.69 | 0.55 | DisCoVER | AIAVLNT-GHTAYQYLAEINDLAP-IDGPAKTAFFTTGAEVELITFG------G--G--FHGRTFMTMALTHGVYVAAIILEQGEGGFNV----APADFMQALRDLCDTHGILLI--AD--E--VQ--TG--F-ART-GK--L----------FA--MQ------HYEV-----------KP--DL--M-----T-M-ASLGLSGVVGRAGALCQRAGSMVALSCGV-YGNVIRFL-YP---LT-I- | |||||||||||||
2 | 3o0yA | 0.07 | 0.05 | 0.72 | 0.83 | DEthreader | --------------------------------------------A-LYLAKQSLFKQRALMEFENEKLRLLSQVMGLRYGENIYFIVLIPRVMNDQP--ITTEK-EALDYI-VRLGQFDKLAATIIKQADANWLPSKVTLQGAIKYLKGFTSGAQHPFVNVFREKIEVDSLTTQKQSLITQVIAKVSQVYPAYQSVESE-GAPNRLVDTLHRAEIERYM-----------------AWPGQA-GYK- | |||||||||||||
3 | 6ayuA | 0.11 | 0.11 | 0.98 | 0.90 | CEthreader | ----HMELVRVTEAGAMAAGRWVGRGDKEGGDGAAVMRGVVVIGEGEKDHAPMLYNVGNGDGPECDFAVDPIDGKGMTNAISVLAVADRGTMFDPSAVFYMNKI-AVGPDAAHVLDITAPISENIRAVAKVKDLSVRDHAQLIHDVRATGIRLITDGDVAGAISGAIQAQLAPRDDAERRKALETTEDLVSGENVFFCATGVTDGDLLKGVRYYPGGCTTHSIVMRSKSGTVRMIEAYHRLSKLNEY | |||||||||||||
4 | 4yuuo2 | 0.03 | 0.02 | 0.64 | 0.75 | EigenThreader | DKTKK------YKVVDLCLEPKQFLTRATYTKFIEKDGMDPFLFSI------------------KKLVASLNNAISTSTELGGEFKVPSYRTGMFLDPKGRGMANGYDMAV----------------------------------------------ALPA--LEADGAVGQEVLRKEND--------KVFQETSGRIELAVNKVDPTSNEIGG----VFVSEQLSDTDPKKLLLKGVF----YARI | |||||||||||||
5 | 2vx8B | 0.17 | 0.08 | 0.47 | 0.30 | HHpred | ----------------GDSAPTLHLNKGMAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSNNKLTYSHGNFHYICQDRIVYLC---------ITDDD---FERSRAF--SFLNEVKKRFQTTYGSPYAMNSEFSSVLAAQ----------------------------------------------------------------------------------------------------- | |||||||||||||
6 | 6ly9N | 0.09 | 0.06 | 0.60 | 0.53 | MRFsearch | ----------------------------------------IPFLLTEKELPLVEEALRKALED-RYLLAHEAYAGGVAALVVVHRKE----VDQAKAALSRAGVAELRLPLSEAARRLKERAEAAPREL-------SEVRQHLAKLARESASTLQSLW---------------TRAQDEVARLKALEELASGFGFALLGYVPVKAK---------KESVVYAFEP---------------------- | |||||||||||||
7 | 2wzkA2 | 0.13 | 0.05 | 0.38 | 0.53 | FFAS-3D | ----------------------------------------------------------------------------------------RNETEKLHLMFSDKVPNGIEPMLKDLEEHIISAGLADMVAAAETITTDEKYREQLDTLFNRFSKLVKEAFQD--------------DPRFLTARDKAYKAVVNDATIF--------------------------------------------------- | |||||||||||||
8 | 2ebfX | 0.11 | 0.10 | 0.89 | 0.53 | SPARKS-K | SESTADLIRFALQDVISAPFRGYAGAIPEAIDF----PVKYVIEDNEGSNSALLPGLLRESQSKGMLSKCRIIEN---------SLYIGHSYEEMFYSISPYSNQVGGPYE-LYPFTFFSMLQEVQLGFEQAFATRNFFNTLVSDRLSLMENTMLLTESFDYTPWDAIYGDINYDEQFAAMINERIEKCMNTYR----GVAFQNSSKNNLTTFINGLTEIAISDLPY---------DIVQQEISQFL | |||||||||||||
9 | 3mx9A | 0.10 | 0.07 | 0.77 | 0.59 | CNFpred | NKEFLLYLAGFVDGDGSIIAQINPNQSSKFKHRLRLT-FYVTQKTQ---RRWFLDKLVDEIG----VGYVRDSGSVSQYVLSEI-----KPLHNFLTQLQP-----FLKLKQKQANLVLKIIEQLPSAK--------ESPDKFLEVCTWVDQIAALNDSKTRKTTSETVRA-------NKEFLLYLAGFVDS----DGSIIAQIKPRQ-SNKFKHQLSLTFAVTQKT-------------------- | |||||||||||||
10 | 4a01A | 0.04 | 0.03 | 0.84 | 0.83 | DEthreader | ----A--GIFALFQWLLVSKVKLSAV-H--VVCAQISATL-----FISSFLLGGVTSLVSGFLGMKITYARTEARKGKATASNIMGDLGSYAESSCAALVVSGLMLYPLIVSSVGILVCLLTTLFATDFFE-IKAVKEIEPALKKQLVISTVLMTIGVAVVSF-V-A-L-PTSKSWQLFLCVAALGMLSTI-TGLDYGISDA----------MSHRIRTLDGTAIGFGINGANKYEA---------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |