Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100
| | | | | |
| Seq | SIRCPYCGGTAILRDASFVYGEKSYGGKVYVCSNYPKCDAYVGVHPGTRIPKGTLADQELRKKRMLAHQIFDQIWLRGILSRPDAYHWLADKFCLSDEQAHIGMFGNYMCDQVIRESKK |
1 | 3gn5A1 | 0.15 | 0.07 | 0.44 | 0.81 | DisCoVER | | HMKCPVCQGEMVSGIKDIPYKTVLKGIHGLYCVH---CEESIMNKEESDAFMAQV---------------------------------------------------------------- |
2 | 4qo5A | 0.10 | 0.08 | 0.75 | 0.83 | DEthreader | | SSDVRLA-PMPRHLSVEAMPTLVVK-LPMPYLISEE-M-----------------QIEETNKATLKTTVLLLKAWQSGLAHLDEIEK-LW---------VESWLFYSWQLTKDIEHMKT |
3 | 2hu9A | 0.15 | 0.14 | 0.94 | 0.64 | CEthreader | | MMRCPECSTEGWRVLPLTVGLWSKIKGDFYFCSLESCEVVYFN-------EQTVFRKGELKTRVGVKEREEPKPVCYCNRVTEKMLLEAAEKFGKEKAVEITGAGKGKWCVVTHWHLER |
4 | 6zymu | 0.09 | 0.07 | 0.78 | 0.68 | EigenThreader | | NMRCKTCGEYIRKETV-QNEVYLGLPIFRFYIKCTRCLAEITFKTENTDYTMEHGATRNFQ----------------LNNPMKVLENRTK------DSKLEMEVL---ENLQELKDLNQ |
5 | 4rulA | 0.32 | 0.15 | 0.48 | 0.40 | HHpred | | SIDCPTCGRKMGIRTAS--------TGVFLGCSGYALCKTTINLVPENEV-LNVLEGAETNALRAK----------------------------------------------------- |
6 | 4kisA | 0.18 | 0.14 | 0.81 | 0.47 | MRFsearch | | -VVCSKCGLGFVHRRKDTVSRGKKYHYRYYSCKTYEKCGNKIWR----------SLNEKLKIEHAKKKRLFDLYING-SYEVSELDSMMNDIDA-----------QINYYEAQIEANEE |
7 | 3gn5A | 0.11 | 0.10 | 0.88 | 0.48 | FFAS-3D | | HMKCPVCHQEMVSGIKDIPYTFRGKGIHGLYC---VHCEESI-----MNKEESDAFMAQVKAFRASVNEFIVKVRKKLSLTQKE----ASEIFGGGVNA--FSRYEKPSTIKLLRVLDK |
8 | 2ojeD1 | 0.07 | 0.06 | 0.87 | 0.68 | SPARKS-K | | -----------SMKLRVENPKKAQKHFVQNLNNVVFTNKELEDIYNLSNKEETKEVLKLFKLKVNQFYRHAFGIVNDYNLLENMMFLKLSVVFDTQRKEAN----NVEQIKRNIAILDE |
9 | 2qizA | 0.16 | 0.08 | 0.51 | 0.45 | CNFpred | | ---------------------------------------------------------AEHKVVIDRLFFIVDKLVRGSLNSRTDMISYFAHIA-PPFKELSSNGFMSNITLLLVRFSQP |
10 | 2c7tA | 0.08 | 0.07 | 0.83 | 0.83 | DEthreader | | FA-------DFNGVPH--SMANMIIEDCSHGSV-------A----AFSCQGKVKNAIEKNAMFLNDALSIDGIRFDPVFLNADQFCEILREKLNMGTFYLVIHAIAPSHLSLLVDAVAE |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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