Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | TDKIEETIKEIAVKHGIAVGRDDPILILQTINERLMQDSAAAQQEILDHFKEELEAIAHRWSDDAKNKAERTLNAALTASRETMTQTMQEGAKSAAELIRREIKAASAQFAAPIHEAKRVALMNLVAAGMTIIAAGLVLWAA |
1 | 6u0tA | 0.08 | 0.07 | 0.89 | 1.17 | DEthreader | | -YF-REHPHW-SD----GEFEGEDLAYDARIKYQKETQKQWIEQQIREKKMREEA-ERNEERAYATQTLELNRMRGMLEDDFNRKKASIRQAVKEENQQLDKQKRDLEKQSNNEKLNYERTEIDMVKT-RG---QK--RP-- |
2 | 6u0tA | 0.07 | 0.06 | 0.86 | 1.33 | DEthreader | | REHPHW-S-----------EFEGEDLAYDARIKYQKETQKQWIEQQIREKKMREEAERNEERAYATQTLELNRMRGMLEDDFNRKKASIRQAVKEENQQLDKQKRDLEKQSNNEKLNYERTEIDMVKT-RG--Q-K-R-P-- |
3 | 5xuaA | 0.14 | 0.03 | 0.20 | 0.64 | DisCoVER | | -----KTYIASRDKVSLKADGMAEEAESTLINSY------------------------------------------------------------------------------------------------------------ |
4 | 2dfsA | 0.07 | 0.06 | 0.95 | 1.17 | DEthreader | | --KQKDVTNVLEK-LILY----VLEKIRADKLRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGW |
5 | 6grjG | 0.07 | 0.07 | 1.00 | 0.46 | CEthreader | | GLLVIGGAFVTAIGAVADFVTTSTPVVIGGVAVAGAGGITAGAIVLHNSLGARQDLYQKRSSLNSEVLIATQIGNGYKGLQVQAQNAVTAATSNAWDSLTSDLGSLITDLDKGITSGDDIRQLWLTAADTTVKTVLTDVTTI |
6 | 4qlbA | 0.13 | 0.13 | 1.00 | 0.65 | EigenThreader | | AVKMNEWKHELFEQCKIGIPHEDIESNDAVILGFMVALFLKHFRESLGRHLCAGDAEAGKRHQYCLERAACQTAAEHFLLHAQNKEKINQFIRGHFEFSNKGGDMFIESLARLNHYLKTTESLKGQAVTKQLKEAVDRIKEK |
7 | 3k66A | 0.16 | 0.12 | 0.73 | 0.30 | HHpred | | -----------------YFKIANW------TNEH--DDFKKAEMRMDEKHRKKVDKVMKEWGDL-ETRYNEQ-KAKDPKGAEKFKSQMNARFQKTVSSLEEEHAVHEERVQAMLNEKKRDATHDYRQALAT----------- |
8 | 2iubG | 0.15 | 0.15 | 0.99 | 0.50 | MRFsearch | | -DVFDPVRERIRYNRG-IIRKKRADYLLYSLIDALVDDYFVLLEKIDDEIDVLEEEVLERQRTHQLKRNLVELRKTIWPLREVLSSLYRIQIADTVETFRDIVSGLLDVYLSSVEVMKVLTIIATILAVMGVIAVIMVVYFK |
9 | 5araT | 0.08 | 0.08 | 0.93 | 0.93 | FFAS-3D | | -----GLILYLLSKEIYVITPETFIGFLVYIVKKYGASVGEFADKLNEQKIAQLEEVKQASIKQIQDAIDQKRHYLFDVQRNNIAMALEVTYRERLHRVYREVKNRLDYHISVQNMMRQKEQEHMINWVEKRVVQSI----- |
10 | 4uosA | 0.08 | 0.08 | 1.00 | 0.68 | SPARKS-K | | NEEVKKMLEKMIEEIKKMLEKKEMLEKMIKEIKKMLEKILKKAKEMAEKILKMVIELAEKILKKAKEMAEKILKKVKELMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLEKILKKAKEMAEKILKMVIELAEKILKK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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