>PF11649 (278 residues) MGAYDTNTGGMFAKLESQKGYDQIYNNHLVNPYFNWVNHTNEQNLTDMLVAESIINRGVE CVYLRREMEKVDLVFGEDPMSKFTQNFRMSLYVESFEGWDGDGDWYSKFGFQVNDEMNVC INPKLFAQQGDGKQPLMGDLIYFPLANSLFEISWIEREDPWYMNGVLPMRKMKMTKFVYS GEEINLEKPEAVIDSIDDILNFGEDTDEMIDIDKINALDGRWDIGIEQGAEITQIEDEVD KFYESEQVVPSGSDVQPTDPRNATIGFNVNNSNPFDSF |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 220 240 260 | | | | | | | | | | | | | | |||||||||||||
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Seq | MGAYDTNTGGMFAKLESQKGYDQIYNNHLVNPYFNWVNHTNEQNLTDMLVAESIINRGVECVYLRREMEKVDLVFGEDPMSKFTQNFRMSLYVESFEGWDGDGDWYSKFGFQVNDEMNVCINPKLFAQQGDGKQPLMGDLIYFPLANSLFEISWIEREDPWYMNGVLPMRKMKMTKFVYSGEEINLEKPEAVIDSIDDILNFGEDTDEMIDIDKINALDGRWDIGIEQGAEITQIEDEVDKFYESEQVVPSGSDVQPTDPRNATIGFNVNNSNPFDSF | |||||||||||||||||||
1 | 6tfqA1 | 0.04 | 0.03 | 0.73 | 0.68 | DisCoVER | TELSGVASEDVT-------------------TLDPHFATTSDRTLVSY-----------IYGALVRFAPGSANPS-----SIEA-DL---AESWES--------------NADQLVWTFKLRQGG-YGNVTDDVVSLDKARDPSAFDYAAIQKVEA---VD------AKTVRITLTRRVPLALLSNFSGGF---II--PKKAPVGFGPFQVESIQP-GQSVTLTANAEYF-R--GK--PKLSKISYDTIEPLGTWARLGWGFELKGSPSAPLITEQT- | |||||||||||||
2 | 2amvA | 0.07 | 0.05 | 0.71 | 0.67 | DEthreader | -----------GIRYEFDWLGNEKARPEFTLPVH-FYGRVEAKWVDTQV-L--PY-NTMRLWISVLYPN--------DNFFEGKRQFVATDIIRF-------------------PDKVAI-------------------QLN----DTHPSLAIPELMRVLVDLERL-AWVTTCAYTNHVPLERWLLLLPRHLQIIYEINQRFLNRVAMIAA--GRIHSELKFYELE------------PHKFQNKTNGIVKRIHKRISTGTEASGTGFSSDIAYARE | |||||||||||||
3 | 6te9E | 0.10 | 0.04 | 0.40 | 1.16 | CEthreader | -----------------------------------------------------RPRLNRLLVLEEAVRVADGA---GGHRLDWQAKGEVWAEVTAGSG----SERAGEFVTLASVPFTIVVRA---APVGAARRPRPEQRFREG--ARIFRILAVAERD-----REGHYLSCFAREEVVA-------------------------------------------------------------------------------------------------- | |||||||||||||
4 | 4bl8A | 0.06 | 0.05 | 0.92 | 0.77 | EigenThreader | KGEIMPNIPQMSAFWYAVRTAVINAASGRQTVDAALAAAQTNAAAGLHAIYGECRRLYNPLQVTA----IVKYWLGGPD-----PLDYVSMYRNVGSPSAN--------IPE---HWHYISFGLARYVFQSENTFCSGDHVSWESRIQHMLLTEDPQMQPVQTP--FGVTFLQIVGVCPIAGGPWLITHLQERVDKGIETDGSNLSGVSAKCAWDDLIRTRQLEQESGALIPLCLRGRDMAITFVSTGVEGAFATEEHPDLEDEFKLPPEKILPDVV- | |||||||||||||
5 | 6lbuB | 0.12 | 0.04 | 0.37 | 0.31 | HHpred | -------------------------------------------DTIAGKIEE----YTLLRL---RIFQFQDISHSH------ERTDGIYLHFSNVPDFNAE-----------ERSYYFLIDETIYDEAFNGERPHKGDILDYRKYDKVVEI-HLKVIS----------------------------IADLDSLRE--FLA----------------------------------------------------------------------------- | |||||||||||||
6 | 2p1gB | 0.13 | 0.05 | 0.36 | 0.52 | MRFsearch | ---------ELYKSLKN------------------------SPENVAQMAKYEKALSGKEVHYLPKDKLE------PDGLPWIKNGDIIALTTNT------PGLDVSHMGIAIYGQLHLLVGKTALSQMLKDRKSLTGIRVLRM-------------------------------------------------------------------------------------------------------------------------------------- | |||||||||||||
7 | 4iw3A | 0.12 | 0.06 | 0.53 | 0.35 | FFAS-3D | --------RALAAECRRRDAEGELNPAGVGRGWIDPGQAEACDQYLAAMDQLRLAINQFECHFALYPPGAFYRRHLDRFRDDDRRMVSAVLYLNEWQPHDG--------G-----QLRMF----LADGVEHDVEPVAGCLVVFLSGEVPHEVLPAGRE------------RLSLTGWFRRRGN----------------------------------------------------------------------------------------------- | |||||||||||||
8 | 5mz9A | 0.15 | 0.12 | 0.82 | 0.76 | SPARKS-K | RLNFNPGNDSLL---------STTDNNIAPISFSFTPFTAAESAV--DLTTSSLKNMGFSVITVSRTGI----ELNQDATTTLDVALAVQSGIQST-----TQTLTGVLPL--SEEFSAVIAKD-----SDQNK-----IDIYKNNNGLFEIDSVATNNPSYTENRVDAWG----KVEFADNSVNLVDKTVDEIITPEILNSF------FRFTPAFE-DQKATLVATKQSD--------TSLSVSPRIQFLDGNFYDLNSTIAGVPLNIGPSRVFAGF | |||||||||||||
9 | 4hk1A | 0.11 | 0.06 | 0.54 | 0.78 | CNFpred | -------------------------------------------TILKKILDAIKDLLEATFDCSDS----GIQLQAMDN-----HVSLVSLTLRS--------DGFDKFR--CDRNLSMGMNLGSMAKILK--CANNEDNVTMKAQADTVTIMFES---------QEKVSDYEMKLMNLDQEHLGI-VVRMPAMEFARICRDLAQFSESVVICCTK----GVKFSAS--------------------------------------------------- | |||||||||||||
10 | 5g4fA | 0.07 | 0.05 | 0.70 | 0.83 | DEthreader | ------MESNNGII--L--RV-AEANSTDRVRLDESSRR-L--LDAEIGDVVVYRARIDSVMR---------------------NNCGAV---EI--------------GEGIEVQLIRRPM------------LE--QDNISVPGLLFKVKTLPSKV----------PVEITKIEIRE-EPASELEEVSRIS-YED-IGGL---LGPPGKIARAVANESGA-EIGVPDNGRKEILMIHTRNMPLRSAALRRYLILDKPIPTEILEKMVVTEDDFKNA | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |