Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | KANVALARSQRLVASWLPPKTQEEQANTKSEEELQREEDEVFTAVPETLGVGAPLPSKAADGSWNRTELDSNDKLRRQLLGKNYKKIMSEKNAAAGRQPSNMGSSSGASFATNQSQTTMDRADDDDDDEDEGRTALVGKKGPTKKRK |
1 | 5b2oA1 | 0.07 | 0.05 | 0.78 | 0.64 | DisCoVER | | ILPIAI--DL-GV-KNT-----------------------GVFGKVYELMALAIIKQVLSAKHQLHIPIITE-SNAFEFLERISPENIFKDKNN--TFVNGTQRYFAEVLAIYTKISFDYFGIPTSYSHLIDAMLAFIGIFSDKK-- |
2 | 5zq2A | 0.05 | 0.05 | 0.87 | 0.83 | DEthreader | | SLYTD--RNARYAYDNYGKPYTGTVEATPVNFRQHHGLAHTLRTM-------AYAEIIVALADVTPELKIMIAQAFFVTGRYQSRDAFLKYVE-ENKSTLIP-VFKDKFYAVDSPAHVQPWIGATAV-ATLQHHQT-KTKS------ |
3 | 1lm5B | 0.11 | 0.11 | 1.00 | 0.38 | CEthreader | | EESSPIAAIFDTENLEKISITEGIERGIVDSITGQRLLEAQAGIIHPTTGQKLSLQDAVSQGVIDQDMATRLKPAQKAFIGFEGVKKMSAAEAVKEKWLPYEAGQRFLEFQYLTGGLVDPEVHGRISTEEAIRKGFIDGRAAQRLQD |
4 | 6fkfp | 0.08 | 0.07 | 0.90 | 0.57 | EigenThreader | | LTLPIIMAEFLFLMFALDKIYYTPLGDFMDKRDASIKEQLSGVKDT------SSEVKQLE---EQANAVMRAARAEISAALNKMKKETQLEVEAKLAEGRKKIEVELQEALGSLEQQKEDTIKSLDSQISALSDDIVKKVLP----- |
5 | 5hb4B5 | 0.17 | 0.05 | 0.29 | 0.24 | HHpred | | ----------------------------------------DSVPFPEWLGSSIRTLGI----------EPYVDFVFD-VFANRTKDISDPSQL------------------------------------------------------ |
6 | 5cwoA | 0.14 | 0.08 | 0.57 | 0.33 | MRFsearch | | -VARAAKVAAEVIKVAIQANRDLFRAALELVRAVIEAIEEAVKQG-----------------------NPELVERVARLAKKAAELIKRAIRAEKE------------------------------GNRDERREALER--------- |
7 | 3um7A2 | 0.12 | 0.08 | 0.66 | 0.55 | FFAS-3D | | RVLSAMLFLLIGCLLFV---LTPTFVFCYMEDWSKLEAIYFVIVTLTTVGFGDYVAGADPRQ---DSPAYQPLVWFWILLGLAYFASVLTTIGNWLRVVSRRT-------------------------------------------- |
8 | 3rj1C | 0.09 | 0.08 | 0.95 | 1.08 | SPARKS-K | | RLAQLTHSLRRIRDESKAELPQWYTLQSQLNVTLSQLVSVTSTLQHFQ----ETLDSTVVYPLPKFPTTSHESLVTTLLRKKNIPEVDEWKYVRETSGVTTALLKDEEIEKLLQQDREITNWARTTFRNEYG----KHDPFNVDDVL |
9 | 4ovkA | 0.12 | 0.05 | 0.41 | 0.50 | CNFpred | | --NVETPLMMKWMGQLIQPDTFNDY-------ILRDDLKQFYNTF-----YHYNLTD---------------SEINTILNISINNTPTF---------------------------------------------------------- |
10 | 3syjA | 0.06 | 0.05 | 0.86 | 0.83 | DEthreader | | -KAQNIMTKAPMIPERFILINVRKYFDEIFERDLHTSLITLY--F---DQKQGSLIFASDINQTWQIVGKLVIVILTVQLRLDLMIVGWFLLGTLFSVSFGKGSANSHFTWTMITLNAYFFTSSLFGKEAG-AL------------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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