Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | EKLDNISKVKTLVGPLRDSLAATLKTAARTLHQNSLVDIGSLKNADDSPPRFDKSMEEFYSICDQIELHLKTSIECLNQGASSQRYLNMTVTPQRSEPVPGQQEMNTLTYPQYLATVRTQVSFAKELHDMLLAAAQNVT |
1 | 6peqE | 0.08 | 0.06 | 0.85 | 1.00 | DEthreader | | -AFTFAAFCYMLSLVLCAALIFFAIWHIIAFDEL-RT---D-RNIERICFLLRK-LVLPEYSIHSLFCIMFLQEW--LT----G--L-VPLLFYHFWR-----FHCPATLSYCQKEAWCKLAFYLLSFFYYLYCMIYTL |
2 | 3g9gA | 0.08 | 0.08 | 0.98 | 1.33 | DEthreader | | VKLLNKDFYLLFKELANLKRNYAQQLRKIIAENEDITKILNLRWIEELKSDLKSSTEYYNTLDQVVRELKESVENN-TSWRESKDLHSKLSKAASHYNEN--HLEEAQWDQQSPYLFELFETIDYNRLDTLKNCMLRFQ |
3 | 1u89A | 0.12 | 0.09 | 0.79 | 0.72 | DisCoVER | | -GSHMQ-AAGQLLRGVG-AAA-TAVTQA-LELLQHVKHATAGRYDQATDTILTVTENIF---S--SM--G--DA--GE-------MVARLATSVIKADAEGESDLNSRKLLSAA-KILADA-TAK-MVEAAKGAA--A- |
4 | 6gy6A | 0.08 | 0.08 | 0.94 | 1.00 | DEthreader | | IKWSGVESKQQQSIDLENAGKQITLTGDEIISVIDIERVKNKLDLTKQVENILESMKKDIKRQQENTQKVKTAVSDFKLEENHDFMWNTTQITRD--K-----F-DDISFVIAFKQVIEPWRDVQGSAAQLIQTFDALA |
5 | 3jacA | 0.03 | 0.03 | 1.00 | 0.80 | CEthreader | | GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG |
6 | 4nqiA | 0.06 | 0.06 | 1.00 | 0.72 | EigenThreader | | LKVNSPPLFTEVIKYQQQAQALSQAGLVLADTLTRLTIHNFKKLADAIKDLENRRDDVAKVLLNEFQAIEDDQKAIATFEKNYKKDRDQRQDILKLEAKTRKAGKITELNDKIKESEQLNANKLRDVVLRKHATFLSQF |
7 | 5svaO | 0.15 | 0.11 | 0.71 | 0.35 | HHpred | | ----IQERLKS-LNDIETQLCSMLQEASQVTFIFG---ELKR-GNESVKPQFENHVKQFYERLDKSTTQLRKEIQLLDENVGT-----------RAL------GQD-------TEKMEEQLDLLSAILDPSK------- |
8 | 2rakA | 0.07 | 0.06 | 0.81 | 0.35 | MRFsearch | | --EQKCEAVGKFTKAMDDGVKELLTVGQEHWKRCTG-------PLPKEYQKIGKALQSLATVETDLNDAITEAGKTYEEIASLVAEQ------------------PKKDLHFLMECNHEYKGFLGCFPDIIGTHKGAIE |
9 | 5f4yA | 0.11 | 0.09 | 0.86 | 0.83 | FFAS-3D | | -----FDKFRMFIGDLDKVVNLLLSLSGRLARVENALNNLDDGASPGDRQSLLEKQR---VLIQQHEDAKELKENLDRRERIVFDILANYL-----------SEESLADYEHFVKMKSALIIEQRELEDKIHLGEEQLK |
10 | 5gnrA2 | 0.10 | 0.09 | 0.94 | 0.67 | SPARKS-K | | SPLKHFVLAKKAITAIFDQLLEFVTEGSHFVEATYKN-----PELDRATEDDLVEMQGYKDKLSIIGEVLSHTIRAKQILATVKNIMDSVNLAAED---GSGLPKEIDQLEKIQNNSKLLRNKAVQLENELENFTKQFL |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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