Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140
| | | | | | | |
| Seq | QAASTYINNVLLARGLVKSGRPIDFAQPENDEGGVEGTMARIINLINDLVLRRDREAEHRENLATTIRTLRAEDSQKMLEIEKLKTKTSELARSLALAEAQERALKTNLSSTEATIRGLKEQIQRMKTNVQQIRAQCANDVRKRDLEMQKLKSHLAE |
1 | 6u0tA | 0.06 | 0.04 | 0.79 | 1.17 | DEthreader | | ------------------FREHPH----NGC-KEEGEDLA-YDARIKYQKETQKQWIEQQIREKKMREEAERNEERAYATQTLELNRMRGMLEDDFNRKKASIRQAVKEENQQLDKQKRDLEKQSNNEKLNYERTEIDMVKT-RG--Q-K--RP--- |
2 | 1ciiA | 0.11 | 0.10 | 0.83 | 1.17 | DEthreader | | --------SGLD--YKRNILNDRNPVV-TED---VEGDKKIYNAEVAEWDKLRQRLLDARNKITSAESAVNSARNNLSARTNEQKHANDALNALLKEKENIRNQLSGINQKIAEEKRKQDELKATKDAINFTTEFLKSVSEGAKA------------ |
3 | 2tmaA1 | 0.12 | 0.09 | 0.77 | 1.18 | FFAS-3D | | ------------------------------------DRAEQAEADKKAAEDRSKQLEDELVSLQKKLKGTEDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAAESRAQKDEEKMEIQEIQLKE |
4 | 2dfsA | 0.04 | 0.04 | 0.91 | 1.17 | DEthreader | | -----------EL-YTKYARLRNPDILVEN-D-WTYQEFFSRYRVLMRADKLRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQK |
5 | 4cpcA | 0.06 | 0.04 | 0.81 | 1.17 | DEthreader | | --------------------------KALL--A-K-RKRLEMYTKASLKTSNQKIEHVWKTQQDQRQKLNQEYSQQFLTLFQQWDLDMQKAEEQEEKILNMFRQQQKILQQSRIVQSQRLKTIKQLYEQFIKSMEELEKNHDNLLTGAQNEFKKEAM |
6 | 6u0tA | 0.08 | 0.06 | 0.81 | 1.17 | DEthreader | | -----------RE-HPH--WSDINGCS----------KE--EG-EDL-AYDARIKYQKETQKQWIEQQIREKKMREEAERNEERAYATQTLELNRMRGMLEDDFNRKKASIRQAVKEENQQLDKQKRDLEKQSNNEKLNYERTEIDMVKTR--GQKR |
7 | 4ll8E | 0.17 | 0.11 | 0.68 | 0.47 | HHpred | | --------------------------------------------------HMESKLLENLNLLKNENENLNSIFERKNKKLKELEKDYSELSNRYNEQKEKMDQLSKLAKNSSAIEQSCSEKLQNMEVNYNSLRDHYSDEISKLNEKIGLLELELSN |
8 | 5y05A | 0.14 | 0.03 | 0.22 | 0.61 | DisCoVER | | QRGA--GA-GPLQGRRC-----G-ACRIEIDDVVRCPEC--GA--IL--L----------------------------------------------------------------------------------------------------------- |
9 | 2tmaA | 0.12 | 0.10 | 0.85 | 0.35 | MRFsearch | | --GMKVIESRAQK---------------------DEEKMEIQEIQLKEAKHIAEDADRKYEEVARKLVIIESDLERAEERAELSEGKCAELEEEIKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLSDKLKEAETRAERSVTKLEKSIDDLEDELYA |
10 | 3na7A1 | 0.07 | 0.06 | 0.76 | 0.97 | SPARKS-K | | ----------------------------------LEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEIKSELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALEL--- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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