Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | GPVQVRWTDPAQFSDIRYSGNRWEAQRGDWVTQLATYFQRSAERQLPDGQRLSVTITDIRRAGQYEPWHGPRMQDVRVVKDIYPPRMSFEYTLTDASGAVIDQGERKLVDSAFLMSGPRMNDTDPLRFEKAMIDDWVRK |
1 | 5t10A | 0.03 | 0.02 | 0.81 | 0.86 | DisCoVER | | RGDKVAVV-S--IANYTET----PDAGHSAESIAANTLRAGGIADVRIARNARYVLSGAVEEWRYKT-----------DGEPVVGVTFELIDVS-----NGAVVWSATGTRTGWSRS--GLSSVATSLIAKVLSPLQ-- |
2 | 2iqiF | 0.09 | 0.07 | 0.78 | 1.00 | DEthreader | | LLVAKPSAA-RIIRINVYHGA-G--WAQPATDMLEDSVVRAFESKIAADYKLAIDVRRFE-SDY---------------QSLPAATIELNAKLLHSSQRVVASRTFTVARP-SS---------AAFEQALTQVTTELGW |
3 | 5ivaB | 0.10 | 0.08 | 0.83 | 0.89 | CEthreader | | KEIDVSARNAYG----------------PTVRELKETLENSGVKVTSNAYHLVLVREDNQQRTVSYTGSA--------RGAEFELTNTINYEIVGANDLVLMSNQVQVQKVYVHDENNLIGSDQAAQLRSEMRRDLIQQ |
4 | 5ivaB | 0.07 | 0.06 | 0.79 | 0.77 | EigenThreader | | KEIDVSARN----------AYG----------PTVRELKETLENSGVAPYHLVLVREDNQQRTVSYTGS----ARGAEFE----LTNTINYEIVGANDLVLMSNQVQVQK-VYVHDENNEAAQLRSEMRRDLIQQLSMR |
5 | 5ivaB | 0.13 | 0.11 | 0.83 | 0.36 | HHpred | | -------DAQFALKEIDVSARN---AYGPTVRELKETLENSGVKVTNAPYHLVLVREDNQQRTVSYTGSA-RGAEFEL-------TNTINYEIVGANDLVLMSNQVQVQK-VYVHD-----ENNLIGSEAAQLRSEMRR |
6 | 5ivaB | 0.14 | 0.10 | 0.71 | 0.40 | MRFsearch | | --IDVSAR----------------NAYGPTVRELKETLENSGVKVTSAPYHLVLVREDNQQR------------TVSYTGSEFELTNTINYEIVGANDLVLMSNQVQVQKVYV----------IGSDQEAAQLRSEMRR |
7 | 2w3xE | 0.06 | 0.06 | 0.91 | 0.54 | FFAS-3D | | -RHVVGFEETNLVGNV--YYVNYLRWQGRCREMFLYEHAPEILDELRADLKLFTLKAECE---FFAELAPFDRLAVRMLVELTQTQMELGFDYLGGDDLLVARGRQRIA---CMRGPNGRTEPVRVPAGVRAFAPF--- |
8 | 3ly7A1 | 0.07 | 0.05 | 0.76 | 0.76 | SPARKS-K | | RDIDINMVN-------KSCNSWSSPYQLSYAIGVGDLVATSLNTFS----TFMVHDK---------INYSSSGKTLSIAFVNQQCFMSIKLVDN-ADGSTMLDKRYVI------------TNGNQLAIQNDLLESLSKA |
9 | 1sbkA | 0.09 | 0.06 | 0.71 | 0.62 | CNFpred | | DTLEATMPVDSRTKQPFGL-----LHGGASVVLAESIGSVAGYLCTEGEQKVVGLEINANHVRSA------REGRVRGVCKP-SRHQVWQIEIFDEKGRLCCSSRLTTAIL---------------------------- |
10 | 4uv2A | 0.04 | 0.04 | 0.83 | 1.00 | DEthreader | | SVYNIQDETG--Q--FKPYPASNFS-TA-VPQSATA-LVTALKDSWFIANIVEGSIIGYE-SNVKS-----------TQY--QLDQIAVNLRVVNVSGEILSSV-NTSKTILSRFIVGYT-S-NEPVLCLSAIETGVIF |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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