Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240 260
| | | | | | | | | | | | | |
| Seq | QQTYGSPEEAVQALIAAMKSHDKKQIGVVLGPYSKDIVSSGDEVADRETLEKFINLYDEKNKIEKAGDSKVVLLVGEKDWPLPIPIVQKGKRWVFDTKSGKEEILNRRIGRNELAVIKVCEAYVDAQQEFALMDTDGDGLFEYAQKFWSTPGKKDGLYWETKEGEEPSPLGPFVAKAKREGYVKSSASDQPQPYHGYFYRILKGQGKNARGGAYDYVVNGNMIGGFALVAYPAQYGNSGIMTFIVNQDGVVYQKNLGKNTANTAQAMKIFDPDKTWQKV |
1 | 3rgaA | 0.06 | 0.05 | 0.83 | 0.65 | DisCoVER | | -HMPAVRKEVALEYCRRVNAGELEGVLQLFAPDA-RLVDPLGTEPVAARLAPALRGAVHEPGPYAADGTSVVLPVTVGAPRVMGVIEVG-EDGLIREMRV--MWGVTDDEERKELARHCLRIND-G-DVDGLLK------LYSPRIRFEDPVGTRTGLEALRAHATMAVVRETAGLTVAGQDG---------RHAAVTVSATMDYGLLAHLMTLAP-ADPHRALIGIEYVMVIGVDLIDEMRAYWGAT------------------DVSLLD------- |
2 | 3opyA | 0.08 | 0.05 | 0.70 | 0.67 | DEthreader | | -------KIA-IITVAGTIIGTARCGGGSLTGVSDDMTGAYSSLERGPFDRFLATVQGVDVRAESTPAIPSPVISI--NKIVRQPLV-------ESVAQTKT--QLRDQEFATSY-ENFLSVSKYDDGSYLV------ESSRLNIAIIFARAVREL--N------WID-VEDWHNTG----SDTLTQQGKSPDRVNRLACCFIEDA-----NFQVKERHLR-AV--T-VVIGIQG----SEV-----------------T---FTPVK----------- |
3 | 3rgaA | 0.04 | 0.03 | 0.91 | 0.61 | CEthreader | | MPAETVRKEVALEYCRRVNAGELEGVLQLFAPDARLVDPPVVGRAALAARLAPALRGAVHEEPGGTSVVLPATVTVGRGRTRVMGVIEVGEDGLIREMRVMWGVTDSSWTARPAPDEERRKELAREHCLRINDGDVDGLLKLYSPRIRFEDPVGSWTRTGLEALRAHATMAVGSNVRETAGLTVAGQDGRHAAVTVSATMDYLPSGPLLARHHLMTLPAPADPHRALIGIEYVDGLIDEMRAYWGATDVSLLDP------------------------- |
4 | 3rgaA | 0.11 | 0.09 | 0.78 | 0.57 | EigenThreader | | MPAETVRKEVALEYCRRVNAGELEGVLQLVDPLGTEPVVG--RAALAARLAPALRG---AVPYAAHDGTSVVLTVGAPGAPPQGVIEVGGLIREMRVMW--------GVTDEERRKELAREHCLRINDDGLLK------LYSPRIRFEDPVG--SWTRTG-----LEALRAHATMAVGS----------NVQDGRHAAVTVDYLLARHHLMTLPAPADPHRALIGIEYVMGVDADGLIDEMRAYWGATDVSLLDP------------------------ |
5 | 5dvyA1 | 0.15 | 0.05 | 0.33 | 0.47 | HHpred | | --AVEAGEKTVEQFVQALNKGDYNKAAESKKAANKSAL---SEK---EILDKYQNIYGAALQISNKDDSTFSYKASLGELKDKGTLDRNDGQTTINWQPN----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
6 | 4r4gA2 | 0.13 | 0.05 | 0.38 | 0.48 | MRFsearch | | ------SAKALSAYVDVLLFKDNADFEKITGANKNEIVNDFDSKALDNIVNGIKEGLSKNSSIQAKTTDEAIVEATVKPKTVEVKKKNDIDQWQLDDDYRAAELVEAFIKE------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
7 | 3k7cA | 0.13 | 0.04 | 0.33 | 0.57 | FFAS-3D | | ----SNPEDLAKNFTKDLYSGDTKSVSYIDLSEAKS---DEEKTFVSDKITQVVAENAAKAKRKTINKDSAKIRVNDNNQSSNVFLAKKDRKWLVLLK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
8 | 6w2wA | 0.10 | 0.07 | 0.66 | 0.73 | SPARKS-K | | ATDKEEVIEIVKELAELAKQSDPNVVAEIVYQLAEVAEHSTDPELIKEILQEALRLAEEQG----------------------------------DAEAARLALKAARLLKECLKAVRAALEAALLALLLLAKHPG-SQAAQDAVQLATAALRAVEAACQYPNSDIAKKCIKAASEAAEEASKAAEEAQRHPDSQKARDEIKEASQKAEEVKERCERA------------------------------------------------------------- |
9 | 5l9wA | 0.08 | 0.06 | 0.73 | 0.64 | CNFpred | | -------AVDLKARCTTADR-VRTRIIELCEREGADYVTGLFRKMLQVAEAGARELIEQWPDGKY--RCVTFSDAVG-VRSCYMTLEKKGDRMLVDLSETGPETPSPY----NAHPQAAIAHFSNYIYEYLFHSLPISNGTFANIDFKFGK----NTCLSPD--RAATSCSVMISTGVMSA------------VHNACAKAMFSTWKQSGASMGN------GGNALVLAGQNQ---GSSFADMLAY--------------------------------- |
10 | 6f3tA | 0.08 | 0.06 | 0.75 | 0.67 | DEthreader | | -YEEYSGL-HL--MYELVNHENAKSFFEKFHGDQYQDLRVLSLHMKNEMLDFRTSK-----LKRHLQE--NIWIVQEHLYI-----------------K--IDAMVGSGEAKREA-NKSKVFFGLLAPPQNRPLPELKDDKK--DPQFSP-YGYYFVLWATDHYQPLR---IF--AGHLADVNCT-----ATGSRTVSLTFSP-N--------------------GRFLATGATDGR--VLLWDI---GHGMVGELKGHDTVCSLRFSGEAIKAFEDLT |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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