Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200
| | | | | | | | | | |
| Seq | NEITHLQAHVKTLRLAAGALFVVTLLLTFGWWSAPKNLTIHVPPDLRSGSTRRWWDVPPESVYTFAFYIFQQLNRWPTDGDADYPRNLHALSAYLTPACRAYLQQDYEYRRSNGELRHRVRGIYEIPGRGYGDDPATRVKVVSNNDWIVTLDVTADEYYGGDQVKRAFVRYPLKVVRMDVDPEHNPFGLALDCYARTPERI |
1 | 4jf8A | 0.10 | 0.06 | 0.64 | 0.83 | DEthreader | | -----------------------------------------------------HESYGEVVDRYWLNQYVLNRTYDYD----TIQLNYDTTALLSTAAVQQEFYKIYEDARDKVLSNKARITVKVR--S-I------QPNGR----GQATVRFTTQQHDSGAVGVKQHQIATIGYTYVGAPRLLNPLGFQVTSY--RTDPE |
2 | 5cnlA | 0.08 | 0.05 | 0.63 | 0.83 | DEthreader | | ----------------------------------------------------G--GPDRAQLAVWANEAIIATYTF---DYKNY-QQQKEIAKYFGIAYSKALNQKLPEVV-QKN-A-YFVNAVAT--EPP------KLITLDPTHWQAI-PILVVYKNPQY-EQKQNLKVVLGFTVASPGQ-GV-RGFSVTSL--QSTPI |
3 | 5cnlA | 0.07 | 0.04 | 0.66 | 0.70 | HHpred | | ------------------------------------------------------GGPDRAQLAVWANEAIIATYTF---DYKNY-QQQKEIAKYFSADGWIAYSKALNQSKLPEVVQKNAYFVNAVAT---EP---PKLITLDPTHWQA-IPILVV-YKNPQYEQKQNLKVVLGFTVASP--GQGVRGFSVTSLQSTPISP |
4 | 5cnlA | 0.05 | 0.03 | 0.65 | 0.94 | DisCoVER | | ------------------------------------------------------GGPDRAQLAVWANEAIIATYTFD--YK--NYQQQKEIAKYFSADGWIAYSKALNQSKLPVVQNAYFVNAVAT--EPP------KLITLDPTHWQA-IPILVVYKNPQ-YEQKQNLKVVLGFTVA-SPGQGV-RGFSVTSLQSTPIS- |
5 | 5cnlA | 0.06 | 0.03 | 0.62 | 0.45 | MRFsearch | | ---------------------------------------------------------DRAQLAVWANEAIIATYTFDYK----NYQQQKEIAKYFSADGWIAYSKALNQSKLPEVVQKNAYFVNAVAT------EPPKLITLDPTHWQAIP--ILVVYKNPQYEQKQNLKVVLGFTVAS--PGQGVRGFSVTSLQ------ |
6 | 5aiwA | 0.06 | 0.03 | 0.60 | 0.97 | SPARKS-K | | ------------------------------------------------------SNTNQSESEKIIKEFYKTVYNY----EKSQKEIMTTVKELATDNVYQELQNEINVNNSYSPQQNTIQKSSV-------NENEIKILAYKDNSQQYLVTAPIHQVFNGTKNDNQLIQIKQKITQRTTIQLGEE--------------- |
7 | 2fxtA | 0.06 | 0.05 | 0.86 | 0.89 | MAPalign | | -IQSLKNKLWDESENPLIVVMRKITKVGGFFAETESSRVYSQFKLMDPTFSN---ESFTRHLREIVPEILEAYVK--------G--DVKVLKKWFSEAPFNVYAAQQKIFKEQDVY--ADGRILDI--------RGVEIVSADIPVLVVGCRAQEILYRKKEIAAILMSSYAMVFTRDQIDDDET-EGWKILEFV--RG-- |
8 | 4lsoA | 0.12 | 0.08 | 0.66 | 0.98 | CEthreader | | -----------------------------------------------------PNNYDEAITRYFASKYVRAREGFQLS---EAEYNFRLISLLSSPEEQNRFAKWYSGNNPESPYHNMTAKVTIKSISFLSKD-------------LIQVRYYKTIRELNGKENISHWVSILNFSYINADRLINPLGFQVSEYRSDPEVI |
9 | 4tlxA | 0.12 | 0.11 | 0.92 | 0.45 | MUSTER | | SRFLDHFRDRDPRSLRRVAVAQSAAEIVRFLHDNRPDTVVHA---IMPSYGYVVADNTPFANQIFDPAAVDDYFDGSKQAKDAFWRYHRNTNYVVDDEVIRDLYRRGYDDEVAGAPRLNFVNLAHV----------VGAKRI-ADDTRVTVYSMAREESYDLDVDVLVCYDPLG-EHCVQDAEGDRDYRMVTTPDLRC--I |
10 | 5cnlA | 0.07 | 0.04 | 0.66 | 1.29 | HHsearch | | ------------------------------------------------------GGPDRAQLAVWANEAIIATYTF---DYKNY-QQQKEIAKYFSADGWIAYSKALNQSKLPEVVQKNAYFVNAVAT---EP---PKLITLDPTHWQA-IPILVVY-KNPQYEQKQNLKVVLGFTVA--SPGQGVRGFSVTSLQSTPISP |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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