Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | KALPKFLLFAVVCTIVGGVVGYYSGHSAAKGGLDQLVGTMKEAGAFFGTHIAPWLMLALAVIVPVVCIPIYRSAKKLVAAWDGEDEDISDTVDRKLSAVIWITSVALIVSYFLIAASYSGGFATFDSKNSTIIFFIGVVAFFGIMAEATIIQQKCVDTAKQTNPEKKASVYDMRFQKKWIDDCDEAEKIMIGKCAFKAYSATNVVCTVLAIVLAVCALVFDIGFLPSLMVCLVWIVNLSVYCKEA |
1 | 4f4cA | 0.05 | 0.04 | 0.86 | 1.00 | DEthreader | | -NGSLRQSLRTLDSFSLA--DGAGLPLMSILQQITGFIVAFWQLTLVMLA-VTPIQALCGFAIAKSMSTFAIRETLRYAKAKVVYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVFDMLTTFSSVMMSM--G----------------------KDAL--S-LK--LAQKTN-FEILYHARHASLFIGMSTATIG-GFIYPTYSVFFTSFWMFLVLAAAQGICSFLMTFFGIAS |
2 | 4ry2A1 | 0.10 | 0.09 | 0.97 | 1.05 | FFAS-3D | | KPLKKTVLCIFLASLLYTALGIAGSFYIKF-LFDDLIKFEKLNDLHIISAGFAVIFLLQIFLNYYRSILVTKLGMSIDKSISRKVGEIISRFMDKIRQAISGATLTIMIDTIMAVIGGILLY-----IQNSSLFFISFIIILLYGIIVTVFNKPIQNANRQIKSFGAEEQTEKSTRDKIETVMKSSFKEGMLYINLSSLTGIVAGLGGIVILWAGAYNVIKGNMSGGQLLAFNALLAYFLTPVK- |
3 | 3rkoC | 0.08 | 0.07 | 0.95 | 1.12 | CNFpred | | KYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHKTRITAATKFFIYTQASGLVMLIAILALVFVHYNVWTFNYEELLNTPSGVEYLLMLGFFIAFAVKMPVVPLH-------GWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSLPL------FPNASAEFAPIAMWLGVIGIFYGAWMARLIAYTSVSHMGFVLIAIYTGSQLAYQGAVIQMIAHGLSAAGLFILC |
4 | 6exsA2 | 0.10 | 0.07 | 0.70 | 0.54 | DisCoVER | | VERSRVKAFLFILGMLFWSIQEQGSVLNIYGLERSDMQLFQSINPLF-----ILLFAPVISMIWLKMGKK----------------------------QPS-LAIKFSIGTLLAGLSYILIGLVGFSVNWVILSYVICVIGELCLSPTGNSA--------------AVKLAPKAFNAQM-------------------MSV--WLLTNASAQAINNYFIFLGTV--AIVITLIILVFSPKIT--- |
5 | 4av3A | 0.06 | 0.05 | 0.86 | 1.00 | DEthreader | | FLIPLVAL--AA--F----------------------RMKEISSYIRSGDSFLAHETKIFLGAVMSAGLLVYIFGKGQVDNL--NIYTFVPFAMTVSGYALGCSIIAMFDVGGGVYTKAADAA-NPATIADNVGDNVGDAGLGADLLESFVGAIVSSIIALISLLLSPWAIGSLGILADYAGLPSVLLLN--VI-GALGAAITYYFSGYL-ISAVTKA-AMKMTDNALKQMGYPAFIILPLVIAS |
6 | 6rkoA | 0.09 | 0.09 | 1.00 | 0.33 | CEthreader | | HYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFNFETMRMEMVSFELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDQKTKLAAIEMVQHTPNVADATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIGEKKWLLRAALYGIPLPWIAVEAGWFV |
7 | 6at7B | 0.08 | 0.08 | 0.96 | 0.65 | EigenThreader | | TKDGPALQVELLRHLNEVVRAAMLVRINTLLQLEAITKLLNTGEAFKIAGVGSALAATVMYDANVLAVLSEVLSAIFCEVMNGKPEYTDAIMEHILDGLGPQIEVLRAATKSIEREV---NSVNDNPNFQ-------GTPIGVSMDNARLAIANIGKLMFAQFSELVIDILKLMSSTYIVALCQAIDLRHLEENIKTSVKNTVTQVAKKVLLVDHALSSGDERSVFSKITEELRAVLPREVEAAR |
8 | 5tj5A | 0.11 | 0.09 | 0.82 | 0.34 | HHpred | | --------------GGGGGGGGGGAQYREI-NAG-----LP----TI--VTFPFMFAIMGFLMTLAALSLVLNEKKINKMK--R-GEIFDMAGRYIILLMGVNSLSILMGFITYSYFFSLANH----LD-IIGNFIPGLLFMQGIFGYLSVCIV-YKWAVDKDGKPAPGLLN-MLINMFLSPGTID------DELYPHQAKVQVFLLLMALVCIPWLLLVKFDIIHTIEFCLNCVSHTASYLRL- |
9 | 2onjA1 | 0.07 | 0.07 | 0.93 | 0.25 | MRFsearch | | --YKYRIFATIIVGIIKFGIPMLIPLLIKY-AIDGVINEKVHHLTIAIGIALFIFVIVRPPIEFIRQYLAQWTSNKILYDIRKQVGQVISRVINDTKDFILTGLMNIWLDCITIIIALSIMF-----FLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERS--------EDNEAKNFDKKNTNFLTRALKHTRWNAYNTVTDIGPIIVIGVGAYLAISTVGTLAAFVGYLELLFGPLRRLVAS |
10 | 6c70A | 0.10 | 0.09 | 0.95 | 1.02 | FFAS-3D | | KFPHRIYCIVTLLLLLLQYGMMAVNLMMESDDVDDLTANT-----------ITMLFFLHPIVKMIYFPVRSKIFYKTLAIWNNLFAESNARFHALAITKMRRLLFCVAGATIFSVISWTGITFIEDSPIHVFALIYQFYYLVISMAVSNSLDQHLKAIMKPLLSATGLTKKQEMLVRSAIKYWVERHKHVVVGDAYGVALLLHMLTTTITLTLLAYQATKNVYAATVIGYLLYTLGQVFLFCI-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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