>PF11363 (193 residues) YWKDADGNLKPEALVKEIDKERDELVRQFVSKAQALSKALGDFKQSVFDDVGAFVSLSAE KYGVKIGGAKGNITLFTYDGEYKLQLAVQENIRFDERIHAAKALIDECLHDWSEGAKPEL KALIDNAFEVDKEGNLSTAKILSLRRVEIDDARWNQAMTAISDSVQVIGSKGYIRFYKRD ENGKYQPISLDMA |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | YWKDADGNLKPEALVKEIDKERDELVRQFVSKAQALSKALGDFKQSVFDDVGAFVSLSAEKYGVKIGGAKGNITLFTYDGEYKLQLAVQENIRFDERIHAAKALIDECLHDWSEGAKPELKALIDNAFEVDKEGNLSTAKILSLRRVEIDDARWNQAMTAISDSVQVIGSKGYIRFYKRDENGKYQPISLDMA | |||||||||||||||||||
1 | 3lijA2 | 0.09 | 0.05 | 0.61 | 0.70 | DisCoVER | YFQLQATLPSL-AN----------------------AIENM-RK--F----------------------------QNSQKLAQAALLYMALTETKELTDIFRGQL--DRQELIDGYSKL-SGEVDAILAADFDR----------------NGYI-DYSEFVTVAMDRSLKLESAFQFDMINDGDVDFFCL-C- | |||||||||||||
2 | 6uz0A2 | 0.04 | 0.03 | 0.76 | 0.83 | DEthreader | L-----TTDPDHGYTLAFRLMQWELYQMI-FM-------------IFLGSFYLVNL--I-----LAVVA-------------------LIISTLAIIVFIFAVVGMQLFGKNYSELRHISLPWHMMDFFHA--FLIIFRILGEWIETWCMGSLCLLVFLLVMIGVVLFLLIGILITSWLLPILGIFTYISLIN | |||||||||||||
3 | 6sbpA | 0.08 | 0.08 | 0.99 | 0.54 | CEthreader | -HHSSGLVPRGSHMPYFIQRLFNTCKSSLSPNGPVSEEALDKVRNVLEKIKPSDVGLEQEAQLVRNWLPAIKYLQLHECDSFSIGIFCMPPGSIIPLHNHPGMTVLSKLVYGSMHVKSYDWAEPDQSELDDPLQARPAKLVKDIDMTSPSPATTLYPTTGGNHCFKAITHCAIFDILSPPYSSTHGRHCNYFR | |||||||||||||
4 | 1si8A | 0.06 | 0.04 | 0.70 | 0.65 | EigenThreader | LTAGEFGPVLIQ---DVHLLEKLAHFNR-----------------------------------ERVVHAKGAGAHGVSYTKALFARFSTTLRDPTPIFFIR--------------DAIKFPDFIHSQKRNPRTHLKSPEAVWDFWSHS------PESLHQVTILMSDGIPLSFGFGKWVNAAGEVFFVKYIKN | |||||||||||||
5 | 3i0tB | 0.13 | 0.06 | 0.49 | 0.26 | HHpred | ------------------------------------QDEFMEKYNELSFCISDFRKDYAE-AFGE--PW-MSFQMTYASGKFNIDFYYDK-NPFDTFLT-RLAWQYEHFGTIPE--DSFYKETLNEYLEEKAQGKRYPF------------------------------------------------------ | |||||||||||||
6 | 4nscA | 0.11 | 0.09 | 0.79 | 0.47 | MRFsearch | --ADLKGKLTIKNFLEFQRKLQHDVLKLEFERHRQFGGMLLAYSGVQSKKLTAMQRQLKKHFKE-----GKGLTFQEVENFFTFLKN-------INDVDTALSFMQQVARTVAKVLSDHVCDVVFALFDCDGNGELSNKEFVSIMKQRLMRMGFTRLMQAMWKCAQ--------------------------- | |||||||||||||
7 | 4rndA | 0.13 | 0.10 | 0.76 | 0.71 | FFAS-3D | -----QG----YSLLKRKSEALTKRFRDITKRIDDAKQKMGRVMQTAAFSLAEVSIGYQVQESVSTARFKVRARQENVSGVYLSQFESYIDPEIGQQVQRAKEIYSRAVETLVELLQTAFIILDEVIKVT-------NRRVNAIEHVII--PRTENTIAYINSEL---------------------------- | |||||||||||||
8 | 5cwcA | 0.12 | 0.10 | 0.84 | 0.68 | SPARKS-K | RERLVKICVENAKRKGDDTEEAREAAREAFELVREAAERASEVLELAIRLIKECVENAQREY------------------------------DISEACRAAAEAFKRVAEAAKRATSSEVLELAIRLIKECREGDISKRVAEAAKRAGITSETLKRAIEEIRKRVEEAQREGNDISEACRQAAEEFRKKAEEL | |||||||||||||
9 | 4aurA | 0.09 | 0.05 | 0.60 | 0.53 | CNFpred | ------------DELNTFVEKNDEDMHRFSNDIKQSRIEVKRLAGELFEELNLMEKQLMSQLRPL-------------------------------DLDDIRPFMDDELGYTEDGVGFKLHLRIKQSVDR-----FFEQSTAVSQRL---SDDITRQLSSSESFLS--------------------------- | |||||||||||||
10 | 5yijA | 0.06 | 0.05 | 0.83 | 0.83 | DEthreader | QHQ---PGMYR-Q--TA-DKKIEPIKQAFQDHSPEAF--K-QIKLND-LSKMSGRTALLHSKQSVYLP--E-DVA-------KSPFTRHSGVEPFRMQAAKLAEVKSSIEAQRAPMVKVVLDALTQCQDAL--EKQNIAGALDALKKPSEIRELREQIQSARQEESL-----TPVVTDE-----KKVRYEKIR | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |