Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | VTSSTKVPTSTSNRNSVDNATSSGPTTGINMTTTHESSVHNVRNNEIMKVLAILFYIVTGTSIFSFIAVLVAVVYSSCCKHPGRFRFADEEAVNLLDDTDDSGGSSPFGSGSRRGSQIPAGFCSSSPYQRLETRDWDEEEEASAARERMKHDPENVIYFRKDGNLDTSFVNPNYGRGSPLTIESHLSDNEEDPIRYYVSVYDELTASEMEEPSNSTSWQIPKLMKVAMQPVSLRDPEY |
1 | 6m39A3 | 0.05 | 0.02 | 0.43 | 0.71 | DisCoVER | | -----------------------------------------------------------------------------M------SAC-------PERP--------------DSYCGSNSCPFKRAVFSNCIV-----------N---Y------TTWVNPDQRDFHLIFNP-FTECNLRIV---------DGCVPGFVLRVGRGYECFGWSWNDNQSIYDWWIADFVTGAFVCESN- |
2 | 5xjjA | 0.08 | 0.06 | 0.71 | 0.83 | DEthreader | | -VIAQYLVVMGHLSGVLATS--VTLHV-C---SNPAMTSSFA--ICEWWLFELLILCSPETSVLSICLTTETLHYVISSGVAGLWLESAFFSILLFTFRNI-IGYA-FSNSVVDYVADLSPLLCLSFILFAVGVARWQHIGAWNNI--F------SY---------YLVGAPVGVYL--------------------------AFRHDL--------N-GKGLWCVVSTATLA----- |
3 | 1jhsA | 0.05 | 0.04 | 0.70 | 0.56 | CEthreader | | -----------------------------------------------------------------------MNNKEVELYGGAITTVVPPGFIDASTLREVPDTQAVYVNSRRDEEEFEDGLATNESIIVDLLETVDKSDLKEAWQFHVEDWEALQEDTVQQGTKFTGLVMPDLAQTVVIGVALIRLTQFDTDVVISINVPLTKEEASQASNKELPARCHAVYQLLQEMVRKFHVVDT |
4 | 5xevA | 0.11 | 0.10 | 0.91 | 0.60 | EigenThreader | | STPQAALAATDLDGWLV-YDFQGLNTRRFFVWVPRAGRAGNWNRITLDAALRGVVSLERVRGALMRAKDDAFRLIHDRLRAGQSVTEWEVQQLIMDQIRAAGMQAGHDVSEQRSATLHPGEEPGRPFAVGFAGEPGQGWELDRAARDAMGELHRTGHDLGVQIHGAGANLDDYETRDLSVTVETYPAAG-GFGIRSEVDVYLAP-----------------DGPEVTTD---LQQAPF |
5 | 6wvgA | 0.11 | 0.06 | 0.58 | 0.33 | HHpred | | -------------------------------SDRKVEGCYAKARLWFHSNFLYIGIITICVCVIEVLGMSFALTLNSQIDK--TSN-SHNVYI--T--ADKQKGIKANF--KIRHNVEDGSVQLADHYQQNTPI-G------DGPVL----LPDNHY-LSTQS---VLSKDPNEKRDHMVLLEFVT----AAGITHHH---------------------------------------- |
6 | 6iiuA | 0.13 | 0.06 | 0.46 | 0.40 | MRFsearch | | -----------------------------WCFLTLGAESGDVAFGLLFSMLGGLSVGLSFLLNTVSVATLCHVYHGMKKY-----------TCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGVGKDQFEEVEERDSEVEMMA---------------------------------------------------------------------------------------- |
7 | 1y1yS | 0.08 | 0.05 | 0.68 | 0.48 | FFAS-3D | | -------------------------NDGVDTAIYHHK----LRDQVLKALYDVLAKESEHPSILHTAKAIESEMNKVNNCDTNEAAY-KARYRIIYSNVISKNNPDLKHKIANG--DITPEFLATCDAKDLAPAPLKQKIEEIAKQNLYNAQGA------TIERSVTDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCT--------------------------------------- |
8 | 3l6wA | 0.08 | 0.08 | 0.98 | 0.68 | SPARKS-K | | ADSGNNNPFFKYHIRSINQDTVRDVNEAIFFSSIFYLALQALEEDNYCDFEVQYEILHNEVHALIMSTLEYSIIWQELQKRRVKSCAGDHVPLHPFNYESVNN--DDFTRENSLPNAVVDSHRFNYKYDNLNLHGHNIEELEEVLRSLRLKS--RVFAGFVLSGIRTTYIKSGTDSDSFVILGGAKEMPWAYERLYRFDITETVHNLNLTTELDASVLPAPIIVRRPDIIEIPIGKDV |
9 | 3v0cA | 0.12 | 0.08 | 0.63 | 0.54 | CNFpred | | --------------------------------------LSSKLNESINKAMININKFLNQCSVSYLMNSMIPYGVKRLEDFDA---SLKDALLKYIYD----NRGTLIGQVDRLKDKVNNTLSTDIPFQLSK---VDNQRLLSTFTEYIKNINTSILNLRYE---SNHLIDL-SRYASKINIGSKVNFDPIDKNQIQLFNL------------------------------------- |
10 | 4d8mA | 0.05 | 0.03 | 0.70 | 0.83 | DEthreader | | ----------------------------------K-DQQLFNAIMDAVNKMVDNKFLSYNLSTLNKTIEGLQGNLGLFQNAIVRVASRFDTANSFLHLLYSTVCLIAATWPT--DTHNYH-GGKL--LTR----LDT--YSRKELTNVPELVNKGFPFEYIQSVGIQITN-T--KYEIRCRYAS--------KGDNNVYFNV-DL-------------S-ENPFRNSISFGSTESSGK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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