>PF11353 (193 residues) TNIKIIGPDRIKLSWEISSNSNQLLPWQEKLQEGFRGISPQANISSNKNGKQLFEVPSLS SNDADILLQNIISIAANAAGFEAPSSSIHLTERNLLIGIDQQLDLNIDLRDFPDIPNLNL AIFLDPASSKNNPKGNPVKPILLDNNLKWELQNGEINKLFLHRWQWSRLGLGTLLIILIM GFSMILQTLKLKM |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | TNIKIIGPDRIKLSWEISSNSNQLLPWQEKLQEGFRGISPQANISSNKNGKQLFEVPSLSSNDADILLQNIISIAANAAGFEAPSSSIHLTERNLLIGIDQQLDLNIDLRDFPDIPNLNLAIFLDPASSKNNPKGNPVKPILLDNNLKWELQNGEINKLFLHRWQWSRLGLGTLLIILIMGFSMILQTLKLKM | |||||||||||||||||||
1 | 2nc8A | 0.12 | 0.09 | 0.76 | 1.35 | DisCoVER | ASITISPDDLVSGEIIAAAKPKDTG--P-AL--DG-DVFVAVSNYDSDGYVGSQAVFSDLT--F-AELPQLANMN-SDA---AG-VNLSLRR----NGNIVILEGRADLTSVS-DPDADVELTVAFPAAVTST----NGDRIEPEVVQWKLKPGVVSTMSAQARYTDPTR----------------------- | |||||||||||||
2 | 2nc8A | 0.14 | 0.10 | 0.76 | 1.08 | SPARKS-K | ASITISPDDLVSGEIIAAAKPKDGDV-------PFSQKVAVSNYDSDGYVGSQAVFSDLTFAE----LPQLANMNSDAAGV-----NLSLRRNG----NIVILEGRADLTSVS-DPDADVELTVAFPAAVTSTNGD----RIEPEVVQWKLKPGVVSTMSAQARYTDPNTRS--------------------- | |||||||||||||
3 | 2nc8A | 0.12 | 0.09 | 0.80 | 1.26 | CEthreader | ASITISPDDLVSGEIIAAAKPKKDTGPALDGDVPFSQKVAVSNYDSDGYVGSQAVFSDLTFAELPQLANMNSDAAG---------VNLSLRRNG----NIVILEGRADLTSVS-DPDADVELTVAFPAAVTSTNG----DRIEPEVVQWKLKPGVVSTMSAQARYTDPNTRS--------------------- | |||||||||||||
4 | 2nc8A | 0.13 | 0.10 | 0.78 | 2.19 | HHsearch | ASITISPDDLVSGEIIAAAKPKDTGP-ALDGDVPFS-QKVAVSNYDSDYVGSQAVFSDLTFAELPQLAN-MNSDA----A----GVNLSLRRN----GNIVILEGRADLTSVS-DPDADVELTVAFPAAVTST--NG---DRIEEVVQWKLKPGVVSTMSAQARYTDPNTRS--------------------- | |||||||||||||
5 | 2nc8A | 0.12 | 0.09 | 0.76 | 1.00 | DEthreader | ASITISPDDLVSGEIIAAAKPK-SKDTGPAL--DG-DVPSQVAVSYDSDYVSQAVFSLTFA-ELPQLANMNS-DAA------G-VN-LSLRRNG----NIVILEGRADLTSVS-DPDADVELTVAFPAAVTSTNG----DRIE-EVVQWKLKPGVVSTMSAQARYTDPNT----------------------- | |||||||||||||
6 | 2nc8A | 0.10 | 0.08 | 0.77 | 1.00 | DEthreader | VRAITISDDLVSGEIIAAAKPKNSKDTGPAL--DG-DVFSQVASNYDSDYVSQAVFSDLTFAELPQLANMNSD-AA------G-VNLSLRRNG-----NIVILEGRADLTSVS-DPDADVELTVAFPAAVTSTN----GDRIEPEVVQWKLKPGVVSTMSAQARYTDPNT----------------------- | |||||||||||||
7 | 2nc8A | 0.13 | 0.10 | 0.78 | 0.94 | HHpred | ASITISPDDLVSGEIIAAAKPKDTGP-ALDGDVPFS-QKVAVSNYDSDYVGSQAVFSDLTFAELPQLA-NMNSDA----A----GVNLSLRRN----GNIVILEGRADLTSVS-DPDADVELTVAFPAAVTST--NG---DRIEEVVQWKLKPGVVSTMSAQARYTDPNTRS--------------------- | |||||||||||||
8 | 2nc8A | 0.12 | 0.08 | 0.66 | 0.92 | MRFsearch | -SITISPDDLVSGEIIAAAK-------------------VAVSNYDSGYVGSQAVFSDLTFAELPQLANMN---------SDAAGVNLSLRRN----GNIVILEGRADLTSVSD-PDADVELTVAFPAAVTST----NGDRIEPEVVQWKLKPGVVSTMSAQARYT--------------------------- | |||||||||||||
9 | 5j6yA | 0.07 | 0.06 | 0.90 | 0.67 | SPARKS-K | DSTPDSLFAGLVGEYYGTNSQLNN---ISDFRALVDSKEADATFEAA---NISYGRGSSDVAK-GTHLQEFLGSDASTLSTDPGDNTDGGIYLQGYVYLTYNFKVTADD-------GYEITIVATVDNNQSVYTVTHASFTISESDMIWWDQGG-DYVFQPTLSADGGSTYFVLDSAILSSTGETPYT----- | |||||||||||||
10 | 2nc8A | 0.08 | 0.07 | 0.79 | 0.92 | MAPalign | RASITDDLVSGEIIAAAKPKNSKDT--GPALDGDVFSQKVAVSNYDS-DGYVGSQAVFSDL--TFAELPQLANMNSDA-----AGVNLSLRRN----GNIVILEGRADLTSVSDPD-ADVELTVAFPAAVTST----NGDRIEPEVVQWKLKPGVVSTMSAQARYTDPNTRS--------------------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |