Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80
| | | | |
| Seq | RRRKRKSRRRLEGRKILDHIPQFNLDSGEEKSVTAARKYIQEKSIQPPALILVRRNEHTVDRFFWAEKGLFGAQYVEENHFLFPSLR |
1 | 2r5gA1 | 0.07 | 0.06 | 0.77 | 0.62 | DisCoVER | | --------------DPE-IELFVKAGSDGESIGNCLFMILWLKGVKFNVTTVDMTRKPEELPPFL----VYNKELKTDFIKIEEFL- |
2 | 2vunA | 0.03 | 0.02 | 0.78 | 0.83 | DEthreader | | KTIIKNIGK-I-VS--GPGVIFGNDAPSTGLIPLGILRNMCQIAAMGNST--------------YGLNTGVIAADLII-IVVVSTPA |
3 | 1lckA | 0.07 | 0.07 | 0.95 | 0.54 | CEthreader | | GQEGFIPFNFVAKANSLEPEPWFF----KNLSRKDAERQLLAPGNTHGSFLIRESESTSFSLSVRDFDVVKHYKIRNLDNGGFYISP |
4 | 1tuoA | 0.07 | 0.07 | 0.94 | 0.77 | EigenThreader | | SHGGPIALREAYFEALKAHGVLYHDSMGGPEPLGVTLAVLG--PETPPSFAVATDGDADRVGVVLP---GHQVLTTLALYRFRKGHR |
5 | 2xxzA | 0.15 | 0.11 | 0.75 | 0.28 | HHpred | | -------------EKLNPPTPSIYLESKRDAFSPVLLQFCTDPR-NPITVI-----RGLAGSLRLN-LGLFSTKTLVEASGEHTV-- |
6 | 2nrvA | 0.20 | 0.14 | 0.69 | 0.60 | MRFsearch | | ---DYESIRTVVKRRYSKHLPNLLFVDGGIGQVNAAIEALKEIGKDCPVVGLAKK----EETVVFEN-------------------- |
7 | 4gnsB2 | 0.12 | 0.09 | 0.78 | 0.35 | FFAS-3D | | --------YQFLNRDIFKSCPRI-MERQFGECLHNRTHLIKDVGLGPIEIVHMSYLNKHEKEYFYV-TGIEVVEFLEV--------- |
8 | 2lciA | 0.13 | 0.13 | 1.00 | 0.76 | SPARKS-K | | ENQGRDVNDSDELKKEMKKLEKILIISNDKQLLKEMLELISKLGYKVFLLLQDQDENELEEFKRKIESQGYELKIVREFMQKAGSLE |
9 | 3iqmA | 0.15 | 0.11 | 0.75 | 0.59 | CNFpred | | ---------QLMGGVALHDGNIAEMKTGEGKTLTSTLPVYLNALTGKGVHVVTV------NEYLA-------SRDAEQMGKIFEFLG |
10 | 1e6vB | 0.09 | 0.08 | 0.92 | 0.83 | DEthreader | | --PMMFAELHLLGYAYQADMVYIVHGK-EGT-VGTVVREVVERAVWNAAAGAANGAARAAVTIYNGVDFAEAAIPPVAA-EPMKT-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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