Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220 240
| | | | | | | | | | | | |
| Seq | LDNILALNLNITLWSARKKLTAEDFGGVELPPDDLASLGSKKICDPARLNVFTKLKARAFSLLDKHGVRFLSGWAIPDDKAGDIIQGLCEIRDEFFTEKQNFLNVYDAAIADWIARHPSWANIIENSTVSREYVESRMGFSWQLYRVSPAAGLESDLAMTESGLHEEVEGLGSTLFAEIAKDAAEIWKKVFEGKTEVTHKALSPLKTMRNKLAGLSFIDPNVEPAVSMIDTALGNMPKRGNLSGNALLTLQGLVCLLKD |
1 | 6ff6A | 0.05 | 0.03 | 0.67 | 0.61 | DisCoVER | | --FYQTFFDEADLLMEHLDLV---P----ESP-DAEQLNAIFAA---------HSI-------------KGGAGTFG--------------F-TMLQYA---VELM---ENMLDFARRQL--NTDIIFLEL--KD-LMQMLDYYK--------------------NKPQSFYQAFFDMADVMLKVME-QLLKLDAAMLNAIFRAAHFIKGAAGT-----FGFTILQETTHLMENLLDEARRLNTDIINLFLETKDIMQ- |
2 | 6r9tA | 0.06 | 0.05 | 0.73 | 0.83 | DEthreader | | -----------WNKESEIEMSR-VK---PLQAAKLSLI-T-PVQ-VRGSQAQPPSAQLALI-AA---SQSFQ-------GP-LEMDSALSVVQNLEK-D------------------------------LKPL--E-----AVAIAQLGPQQLAQVAKAVTALNCV--DAQQGLVEPTQFARANQAIQMACQSLGVAATIVAKHTSALCNSCRLASTNAKQFVQSAKEVANSTANVKIKALQCRAATAPLLEAVDNLSA |
3 | 3pjaJ | 0.08 | 0.07 | 0.84 | 0.54 | CEthreader | | --------------------SSPVMLAFKSFQQELDARHDKYERLVKLSRDITVESKRTIFLLHRITS---------APDMEDILTESEIKLDGVRQKIFQVAQELS----------GEDMHQFHRAITTGLQEYVEAVSFQHFIKTRSLISMDEINKQLIFTLRVTPVDYLLGVADLTGELMRMCINSVGNGDIDTPFEVSQFLRQVYDGFSFIGNTPYEVSKKLYTLKQSLAKV--ENACYALKVRGSEIPKHMLAD |
4 | 2j0oA | 0.08 | 0.06 | 0.75 | 0.75 | EigenThreader | | ---------------------------------------HPVSSLTMLNDTLHNIRTTNQALKKELSQKT-----LTKTSLEEIALHSSQISMDVNKSAQLLDILSRH-----------------EYPINKDARELLHSAPKEAE----LDGDAKIANSINDINEQYVYEHAVSSYTQMYQDFSAVLSSLAGDGNSVVNSLKKALEELKEKYKDKTELGGTIMTPIDNMLKSLDNLGGNGEKYQAWNAGFSAEDETMKN |
5 | 6e6aB | 0.16 | 0.08 | 0.49 | 0.39 | HHpred | | -----------------------------------------------------------------------------VGSLKEINFMLSVLQKEFLHLSKEFSQDFYSCLQAFRDNYKGFESLLDEYKNSTEEMRKLFSQ----------------------EIIADLKGSVASLREEIAEEVRRLAH----NQQSLT-AAIEELKTIRDSLRD------EIGQLSQLSKTLTSQI----------------------- |
6 | 3s84A | 0.10 | 0.07 | 0.73 | 0.50 | MRFsearch | | ---------------------------------------------EKLKEEIGKELEELRARLL----------PHANEVSQKIGDNLRELQQRLEPYADQLRTQVNTQAEQLRRQLTPYAQRMERVLPHADELKAKIDQNVEE--------LKGRLTPYADEFKVKIDQTVEELRRSLAPYAQDTQEKLNHQLEGLTFQMKKNAEELKARISASEELRQRLAPLAEDVRGNLRGN------TEGLQKSLAELGGHLDQ |
7 | 5nl6A | 0.12 | 0.08 | 0.73 | 0.87 | FFAS-3D | | ---------------------------------------------EGMVHDYEQRAQALKENIEAA-----------INKMNGVYHQVKEQINETKNYRKGDKRAFIKEQGDLATLFGQINSKLRGMGLDPKSLEGYI------------ANISEAERALRSKLNTAMRNCLIALRKAFADPANATDAKINEYRTFVTEEQVATLKAKLEELKQV---EAQLPPIEEAEKACEDANIEDNEYTDVSFDDLQFNYEQTVS |
8 | 4uosA | 0.11 | 0.08 | 0.68 | 0.64 | SPARKS-K | | ------------------------------------------GDNEEVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLEDSEKILKKAKEMAEKILKMVIELAEKILKKAEKILKKVKELGVDNE-------------------EVKKMLEKMIEEIKKMLEKAIKKVKEMLEKMIKEIKKMLENGEDS--EKILKKAKEMAEKILKMVIELKKAKEMAEKILKKVKELGVG-------------------- |
9 | 5j1iA | 0.07 | 0.05 | 0.72 | 0.65 | CNFpred | | -----------------------------------------------LGKGVARLSAEAEKVLAL------------SPAAPTLRSELELTLGKLEQVRSAIYLEKLKTISLVIRGTQGAEEVLRA---HEEQLKEAQAVPATLPELEA---TKASLKKLRAQAEAQQPTFDRDELRGAQEVGERLQQRHGERD-VEVERWRERVAQLLERWQAVL---AQTDVRQRELEQLGRQLR----YYRESADPLGAWLQDARR |
10 | 6ux2A1 | 0.09 | 0.06 | 0.68 | 0.83 | DEthreader | | -----------LLP-VD-----------------------IRQYLAVWIEDQ-NW-QEAA-L------------------------GS-D-DSKATMLFFHFLDQLN---------QDPESLLLQHNLRKFCRDIQPFSDQKKSISLK--QDVFCLLDKRRKEVLDASKALLGRLTTLIELLLPKLEEWKAQKACIIDHGLEQLETWFTAGAKLLFRNVTELLQRLLHAFTRLRVLGQGIWDFISFTKTDT-------- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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