Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60
| | | |
| Seq | NSPLREEPRNQRAAVIPLKQESSLLDWLQSNGRLIARDVHEPDFSDEEEEISEFLGGEDGIDLDYDDDDD |
1 | 6sa8A6 | 0.11 | 0.06 | 0.50 | 0.67 | DisCoVER | | -LAAMCGHL--ADVNAQDKFGKTPFDLAIDNGNEDIAE-------------------------------- |
2 | 5vmkA | 0.04 | 0.04 | 0.97 | 0.83 | DEthreader | | -ILAAGGTRMRSLLQPRPGHKTALYGDVPVEVEGVNDRLQALEFQQQALML-GTVKELVTTIDGARPNTT |
3 | 2xzlA1 | 0.04 | 0.04 | 1.00 | 0.61 | CEthreader | | AKCVIKCNSCKKCNTKNGTSSSHIVNHLVLSHHNVVSDTVLECYNCGRKNVFLLGFVSVVLLCRIPCAQT |
4 | 7bqfA | 0.05 | 0.04 | 0.93 | 0.62 | EigenThreader | | PGWSVDWTMRGRKYYIDHNTNTTHW--SHPLERERVESEFGTYYVTNKQYRHP---CAPSVPRYDQPPPI |
5 | 2c2lA | 0.14 | 0.11 | 0.84 | 0.29 | HHpred | | ----KRKKRDIPEPCITPSGRKDIEEHLQRVGHFNPVTRSPQEQLPNKEVIDAFISENGWVED------- |
6 | 2oajA | 0.21 | 0.11 | 0.56 | 0.50 | MRFsearch | | --------LYINGIRIPYRPQVNSLQWARG------------TVYCTPAQLNELLGGVN----------- |
7 | 1i96R | 0.15 | 0.11 | 0.77 | 0.32 | FFAS-3D | | KPKKEAQRRPSRKAKVKATLGEFLKRFLSETGKILPRRRTGLS-GKEQRILAKTI--------------- |
8 | 5ady62 | 0.12 | 0.10 | 0.84 | 0.67 | SPARKS-K | | ------GEVAQHTLRLP-PQEGRLRSRFYQLQAIEKEWMEEDQVRMPIVDWRRLCKQEPALIDYLI---- |
9 | 1lvaA | 0.21 | 0.10 | 0.49 | 0.49 | CNFpred | | ----------------------ELLHYLVREGVLVKINDEFYWHRQALGEAREVIK-------------- |
10 | 6jsjA | 0.11 | 0.10 | 0.89 | 0.83 | DEthreader | | ----LVLA--TRYWKDFLDKRCKVLSFRLKMLCCEVSAVSLTTAVLFNVELLSDFFYNFPILDLTLGD-- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
|