Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threading program | | 20 40 60 80 100 120 140 160 180 200 220
| | | | | | | | | | | |
| Seq | TCFLSQAQKKDAAFETGEWFKFRIHYGFINASYATLEVKDDYLNGKSVYHVVGKGKTTGFASIFFKVDDNYESYFDKNSGKPYKFIRQIDEGGHTKDIEIDFNHEKEKALVNNKKHKTKEEINIEKNVQDMVSAFYYLRNNYDVSSIKEGDEVVLNMFFDKENFKFKLKFLGRETMRTKFGKVPCLKFRPYVQAGRVFKESESLTLWVSDDENKIPIRIKAKLVVGSLKADLDA |
1 | 5uc2A | 0.08 | 0.07 | 0.88 | 1.17 | DEthreader | | --------A-VRLVP--HRAIYDLTLRAGLTGR-VYEFNGSA---CEGYTTNFRFVTRVDDQPQRVTDQQTTTFEDADG-KDFRFVNKTFVDKELKEVRGDAKLEDTVVKLSKP---KENTLDLKGTQF---P--TRHEELIGKAEAGQKFYQTTLFDSDDRVVATTVVVGKQQAVPDDTKKDQVWPVTIAYFDDKEQQGPYRINFKLY--RNGITRDLTD-YGDFS-RGKLVL |
2 | 5uc2A | 0.09 | 0.08 | 0.87 | 1.17 | DEthreader | | ---------AVRLVP--HRAIYDLTLDRGLTGR-VYEFNGS----CEGYTTNFRFVTRVDDQPQRVTDQQTTTFEDADG-KDFRFVNKTFVDKELKEVRGDAKLEKTVVKLSK---PKENTLDLKGTQF---P--TRHEELIGAEAGQ--KFYQTTLFSDDRVVATTVVVGKQQAVPDDKSKDQVWPVTIAYFDDKEQQDGPYRINFKLY-RNGITRDLTD-YGDFS-RGKLVL |
3 | 6ntrA | 0.11 | 0.09 | 0.85 | 0.40 | HHpred | | -----------AVRLVPHRAIYDLTLDRALTGR-VYEFNSAC----EGYTTNFRFRVDDEQ-PQRVTDQQTTT-FEDADGKDFRFVNKTFVDKELVRGDAKLEDGKTVVKLSK---PKENTLDLKG-TQFPTRH-EELIG-----KAEAGKFYQTTLFDASERVATTVVV-GKQQAVPKFSKDQVWPVTIAYFDDKQDGPIYRINFKLYRNG--ITRD----TDYGDFSGKLV- |
4 | 4fvsA | 0.08 | 0.06 | 0.80 | 1.00 | DisCoVER | | QDCTFFF-----PQTEGTVWVRKGYDAGNLQSVSYQVDEVE-TLPSGQEVEADYVYTN--PSGTIVNKGDIKAYCQNGEFFLDSKELVVSNT----NVDITE-------------------------NFI--N------YPN-PYAFDKVYFDEASVKIYNRKDAIKREFIKTESITTPAGTFDCAKVKYNIATRSPKETITGYGYEWYSPNVGLVRTEQYDKNVLQSYTVLE- |
5 | 4fvsA | 0.13 | 0.09 | 0.68 | 0.77 | MRFsearch | | ----------------------------------------------TVWVRKGYDA----KGNLQSVSYQVDEVETLPSGQEVEADYVYTNPTIVNKGDIKAYCQNGEFFLDSKEENTNVDITE------------------------DEASVKIYDKKNRKDAIKDREFIKTESITTPAGTFDCAKVKYNIATRSKETITGYGYEWYSPN--VGLVRTEQYDKVLQSYTVLEE |
6 | 4fvsA | 0.14 | 0.12 | 0.81 | 1.04 | SPARKS-K | | -----QDCTFFFPQTEGTVWVRKGYDAKGNLQSVSYQVDEVETLP-SGQEVEADYVYTN------------------------------PSGTIVNKGDIKAYCQNGEFFLDPGVVSENTNVDITENF-------INYPNPYAANFDKNNVEASVKIYDKKNRKNRKREFIKTESITTPAGTFDCAKVKYNIAPKSKETITGYGYEWYSPN--VGLVRTEQYDKNNQSYTVLEE |
7 | 5uc2A | 0.10 | 0.09 | 0.88 | 1.26 | MAPalign | | ------------VRLVPHRAIYDLTLDISGLTGRVYEFNGSA---CEGYTTNFRFVTRVDDQPQRVTDQQTTTFEDA-DGKDFRFVNKTFVDKELKEVRGDAKLEDGKTVVKLKPKENTLDLKG---TQFPTRH-EELIG-----KAEGQKFYQTTLFDADRVVATTVVVGKQQAETKVFSKDQVWPVTIAYFDDKEQGPIYRINFKLYRN--GITRDLTDYG--DFSRGKLVK |
8 | 5uc2A | 0.11 | 0.10 | 0.94 | 1.02 | CEthreader | | -------AVRLVPHRAIYDLTLDRADEKSGISGLTGRVYEFNGSACEGYTTNFRFVTRVDDEQPQRVTDQQTTTFEDADGKDFRFVNKTFVDKLVKEVRGDAKLEDGKTVVKLSKPKENTLDLKGTQFPTRHEELIGKAEA-------GQKFYQTTLFDADRVVATTVVVGKQQAVPDDETKVGVWPVTIAYFDDKEQQDGPIYRINFKLYRNGITRDLTDYGDFSRGKLVKLD |
9 | 4fvsA | 0.13 | 0.11 | 0.83 | 0.73 | MUSTER | | -----QDCTFFFPQTEGTVWVRKGYDAGNLQSVSYQVDEVETLPSGQEVEADYVYTNP-----------------SGTIVNKGDIKAYCQNG------EFFLDS--KETLSYPGVVSENTNVDITEN-------FINYPNPYAANFDKNNVYASVKIYDKKKDAIKDREFIKTESITTPAGTFDCAKVKYNIAPKSKETITGYGYEWYSP--NVGLVRTEQYDKNNVLQSYTVE |
10 | 5uc2A | 0.10 | 0.09 | 0.86 | 0.90 | HHsearch | | ----------AVR-LVPHRAIYDLTLDRALTGR-VYEFNGS---ACEGYTTNFRFVTRVDDEQQRVTDQQTTTF-EDADGKDFRFVNKTFVDKELKEVRGDLEDGKTVVKLSKP---KENTLDLKG-TQFPTRH-EELIG-----KAEAGKFYQTTLFDADRVVATTV-VVGKQQAVPKFSKDQVWPVTIAYFDDQQDGPIYRINFKLYRNG--ITRDLT-DYGF-S-RGKLVK |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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