Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120
| | | | | | |
| Seq | HVAPGQRVAYDQSPPFGGPHDSVWATCTGTVYEQPVRTENMVHSLEHGAVWVAYNPDLLDDAAVDTLRQKVDGRTYTLMSPYPDLDTPIALQSWGHQLKVDSVDDERIDQFISALRLNQYTYPEVGA |
1 | 1faaA | 0.11 | 0.09 | 0.79 | 1.00 | DEthreader | | ----LEL-------------ALGEMAIVGKVTEVNDTFWPIVKAAGDKPVVLDMFTQCGPKAMAPKYEKLAEEYLDIFLKLDCKAIVPTFKILKSVVGEVTGAKYDKLLEAIQAAR-S--------- |
2 | 1faaA | 0.11 | 0.09 | 0.78 | 1.00 | DEthreader | | ----LE--------------LALGEMIVGKVTEVNDTFWPIVKAAGDKPVVLDMFTQCGCKAMAPKYEKLAEEYLVIFLKLDCAIRVPTFKILKSVVGEVTGAKYDKLLEAIQAAR-S--------- |
3 | 2diyA | 0.07 | 0.05 | 0.72 | 0.71 | DisCoVER | | -------------------------AAVAAVEEVGSQFELLRLKA--KSLLVVHFWAQCAQ-MNEVMAELAKELPQVSFVKLEVSVPTFLFFKNSKIDRLDAHAPELTKKVQRHAS------SGPS- |
4 | 2l5oA | 0.09 | 0.07 | 0.79 | 1.00 | DEthreader | | -----------DSK-TAPAFS----------PDLHGK-TVSNADLQ-GKVTLINWFPCGCVSEMPKIIKTANDYKNFQVLAVQKGQYTSVLIGGEILKTYVEPDFGKLYQEIDTAWRNS-DAGHH-- |
5 | 5e37A2 | 0.04 | 0.04 | 0.89 | 0.89 | CEthreader | | --------------GSSGSLVDAVEGDMTLIFSEEELDALISANPDKLVVVFGALTWCPCKGMQRPVQKLAEHYKVFVKLFGNQIRSTPCFITLRPVYTQTGSNKEKLEAGLRSLIANPPVGMIYPS |
6 | 2b1kA | 0.10 | 0.09 | 0.86 | 0.82 | EigenThreader | | --------LESALIGKPVPKFRL------ESLDNPGQFYQADVLTGKPVLLNVWATWCTCRAEHQYLNQLSAQGIRVVGMNYKDVYGAPETFLIIIRHAG-DLNPRVWEEEIKPLWE---KYSKEAA |
7 | 6ptmA | 0.10 | 0.08 | 0.76 | 0.33 | HHpred | | ------------------------NFSG--LPIGFATEGILKNNPHEWDAIVVYKTPYAFKSDIETVQKYLDECGTVIIDNESFKDGRKIKQGKGKLIVVSTLNE-MKNEALAAVKSNKGMPMI--- |
8 | 3uemA2 | 0.12 | 0.07 | 0.57 | 0.48 | MRFsearch | | -----------------------------------------------KTHILLFLPKSDYDGKLSNFKTAAESGKILFIFIDSKEECPAVRLITMTKYKPESLTAERITEFCHRFLEGK-------- |
9 | 2kp2A | 0.15 | 0.12 | 0.80 | 0.42 | FFAS-3D | | --------------PLGSP----------LIGEIGPETYSDYMSAGIPLAYIFAETAEERKELSDKLKPIAEAQRGVINFNLKTDKFPAFAIQENQKFPFDEITFEAIKAFVDDFVAGSEPIPEKQ- |
10 | 5xf7A2 | 0.06 | 0.05 | 0.76 | 0.68 | SPARKS-K | | --------------------------TDFVIEYNTENKDLISELHIMSHMLLFVSKSSESGIIIQHYKLASKEFQILFILVDADFRVTVQILNSDARYKMPSITYESLKKFGRSFLSKNATKH---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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