>PF11274 (185 residues) WFARTSVHEGLGFAKWKRAMMREFPESLAVEGGPGVGNIRGIGGDRRLEDIVIDGAGKLE VYQLSAQFPGPTAPREFITLLLTSENCLSEASKVGNVVPRHYMVVSIPVTHPDAPPREGL VRGSYESVEMIREIPLGSSDDPETNPVEWIMITRSDPGGGIPRFMVERGTPGSIVADAGK FLDWA |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | WFARTSVHEGLGFAKWKRAMMREFPESLAVEGGPGVGNIRGIGGDRRLEDIVIDGAGKLEVYQLSAQFPGPTAPREFITLLLTSENCLSEASKVGNVVPRHYMVVSIPVTHPDAPPREGLVRGSYESVEMIREIPLGSSDDPETNPVEWIMITRSDPGGGIPRFMVERGTPGSIVADAGKFLDWA | |||||||||||||||||||
1 | 2e3mA | 0.11 | 0.10 | 0.90 | 1.17 | DEthreader | PLKATHAVKGVTGHEVCNYFWN-VDVRNDW--E----TT-IE-NFHVVETLA----DNAIIIYQTHKRVWPASQRDVLYLSVIRKIPAL--TEN---DPETWIVCNFSVDHDSAPLNNRCVRAKINVAMICQTLVSPPEGISDNILCKITYVANVNPG-GWAPAVLRAVAKREYPKFLKRFTSYV | |||||||||||||
2 | 2e3mA | 0.13 | 0.11 | 0.90 | 1.17 | DEthreader | PLKATHAVKGVTGHEVCNYFWN-VDVRN-D-------WETTIENFHVVETLA----DNAIIIYQTHKRVWPASQRDVLYLSVIRKIPALT-E---N-DPETWIVCNFSVDHDSAPLNNRCVRAKINVAMICQT-LVSPPEISDNILCKITYVANVNPGGWAPASVLRAVAKREYPKFLKRFTSYV | |||||||||||||
3 | 2e3mA | 0.12 | 0.10 | 0.89 | 1.77 | HHpred | --LKATHAVGVTGHEVCNYFWN--VDVRND-------WETTIENFHVVETLAD----NAIIIYQTHKRVWPASQRDVLYLSVIRKIPALTE-----NDPETWIVCNFSVDHDSAPLNNRCVRAKNVAMILVSPPEGNQEISRDNILCKITYVANVNPGGWAPASVLRAVAKREYPKFLKRFTSYV | |||||||||||||
4 | 2e3mA | 0.12 | 0.10 | 0.89 | 1.03 | DisCoVER | PLKATHAVKGVTGHEVC--N--YFWNVDVRN-----DWETTIENFHVVETL----ADNAIIIYQTHKRVWPASQRDVLYLSVIRKIPALT-----ENDPETWIVCNFSVDHD-SALNNRCVRAKINVAMICQTLVSPPEISRDNILCKITYVANVNPGGWAASVLRAVAKPKFLKRFTSYVQIL- | |||||||||||||
5 | 2e3mA | 0.12 | 0.11 | 0.89 | 0.75 | MRFsearch | --KATHAVKGVTGHEVCNYFWN--VDVRND-------WETTIENFHVVETLA----DNAIIIYQTHKRVWPASQRDVLYLSVIRKIPALTEN-----DPETWIVCNFSVDHDSAPLNNRCVRAKINCQTLVSPPEGNQEISRDNILCKITYVANVNPGGWAPASVLRAVAKREYPKFLKRFTSYV | |||||||||||||
6 | 2e3mA | 0.13 | 0.11 | 0.90 | 1.60 | SPARKS-K | PLKATHAVKGVTGHEVCNYFWN--VDVRNDWE-------TTIENFHVVETLAD----NAIIIYQTHKRVWPASQRDVLYLSVIRKIPALTEND-----PETWIVCNFSVDHDSAPLNNRCVRAKINVAMICQTLPPEGNQEISNILCKITYVANVNPGGWAPASVLRAVAKREYPKFLKRFTSYV | |||||||||||||
7 | 2e3mA | 0.13 | 0.11 | 0.90 | 1.08 | MAPalign | PLKATHAVKGVTGHEVCNYFW---------NVDVRNDWETTIENFHVVETL----ADNAIIIYQTHKRVWPASQRDVLYLSVIRKIPA-----LTENDPETWIVCNFSVDHDSAPLNNRCVRAKINVAMICQTLVSPPEISRDNILCKITYVANVNPGGWAPASVLRAVAKREYPKFLKRFTSYV | |||||||||||||
8 | 2e3mA | 0.12 | 0.11 | 0.90 | 1.03 | CEthreader | PLKATHAVKGVTGHEVCNYFWNVDVRNDW---------ETTIENFHVVETLAD----NAIIIYQTHKRVWPASQRDVLYLSVIRKIPA-----LTENDPETWIVCNFSVDHDSAPLNNRCVRAKINVAMICQTLVSPPEGSRDNILCKITYVANVNPGGWAPASVLRAVAKREYPKFLKRFTSYV | |||||||||||||
9 | 2e3mA | 0.13 | 0.11 | 0.89 | 1.09 | MUSTER | PLKATHAVKGVTGHEVCNYFWN-----VDVRND-----ETTIENFHVVETLA-----NAIIIYQTHKRVWPASQRDVLYLSVIRKIPALT-----ENDPETWIVCNFSVDHDSAPLNNRCVRAKINVAMICQTLVSPPEISRDNILCKITYVANVNPGGWAPASVLRAVAKREYPKFLKRFTSYV | |||||||||||||
10 | 2e3mA | 0.11 | 0.10 | 0.90 | 2.55 | HHsearch | DPLKATHAVKVTGHEVCNYFWN--VDVRND-------WETTIENFHVVETLAD----NAIIIYQTHKRVWPASQRDVLYLSVIRKIPALT-----ENDPETWIVCNFSVDHDSAPLNNRCVRAKNVAMILVSPPEGNQEISRDNILCKITYVANVNPGGWAPASVLRAVAKREYPKFLKRFTSYV | |||||||||||||
|
|
References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |