Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | | 20 40 60 80 100 120 140 160
| | | | | | | | |
| Seq | MRELKVIGLSADGKRVICQDANGTDKFAIDADDRLRAAARGDLSRLGQIQIEMESSLRPREIQARIRAGATVQQVATAAGVDVSRIERFAHPVLLERQRAAEMASAAHPVRNDGPAVSTLADTVAGAMFARGGDPDAIEWDAWKVEDGRWTVQLQWRTGRSDNKAHFRY |
1 | 3p7nA | 0.10 | 0.08 | 0.73 | 0.80 | DisCoVER | | SPIASVVSDPLADNPLIAINAFGYSECVGRN-------CRF---------LAGGTETKIRQGVREHKP---VLVEI--LNYPFRNAVLVAPYF--L--GS--QVEVGMARRE------RAAEML--TL--SPRQLEVTTLVASGLRNKEVSADLVRI-------AVEA- |
2 | 4i3hA | 0.04 | 0.03 | 0.76 | 0.83 | DEthreader | | FTQDPQRLMLSEIAGYLLIVPFEPLPAFNVNG---ST--GISAYAT---DI-PP-HNLVIDAAVYMIDHPAKIKLMEFLPKYETGIVPILSSYIAHRREVILRSRFDKA---EEAELREK-IAMLAAI------G-DERMYMKKELREVK------------------- |
3 | 6rtdA | 0.11 | 0.11 | 1.00 | 0.77 | CEthreader | | GLNTRNLAVSDDGRWVLVGNYLPGNLVLLDARSLVQVIPAADAQGQASRVSAVYTAPPRHSFVVALKDVHELWELPYANGKPVAPKRLAVADYLDDFSFSPDYRYLLGSSRQARGGEVIELDSGARVASIPLSGMPHLGSGIYWKRDGRWVFATPNISRGVISVIDLQN |
4 | 3chnA | 0.04 | 0.04 | 0.85 | 0.62 | EigenThreader | | SYGLHWVRQAPEDTAYYCARDPYGGGGTLVTVSSASPTATQCKHYTNPSPSTPPTPSPS------CCHPRPALEDLLL--GSEANLTCTLTGLR---------DWTPSSGKSAVQGPAEPWNH--------GKTTFRPEVHLLPPPNELVTCLARGFSTTTFAVTSILR |
5 | 6trsA2 | 0.17 | 0.11 | 0.61 | 0.27 | HHpred | | --------PSAHKGSIIIET--NYRLYAYTSSPLQIAVLA-LFTHLNMRAGMVTGRLTRESIRRAISFGITADQII-------SYLASHAHEQMVRAAAA----------AGRPVLPPTVVDQIRLWQLEN-------------------------------------- |
6 | 5vfzA | 0.13 | 0.09 | 0.70 | 0.52 | MRFsearch | | --QIKGEHLDLIERTMTVTGK-GNVTATLPLHHRVVEIAYQMPRRGHWFPGPDRGHQRRESVSALLEAGVDLRTVQELMRQSLTSTEIATRVTDQRRAEGIERLDPF---------RTRVTDRLLAQIAE--------------------------------------- |
7 | 5o8yA | 0.12 | 0.08 | 0.62 | 0.57 | FFAS-3D | | --SIIVLTMNNNPAILSAVLDLDIEGIVLKLPKALAALQKGKLLEKISAGGYGDKRLSPKEVLRLFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKDIALLNYLSSV-------------------------------------------------------------- |
8 | 5cwqA2 | 0.12 | 0.08 | 0.70 | 0.60 | SPARKS-K | | ------------------------SEEAERASEKAQRVLEEARKVSEEAREQGDDEVLALALIAIALAVLALAEVACCRGN-----KEEAERAYEDARRVEEEARKVKAEEQGDSEVKRLAEEAEQLAREARRHVQECRGGWLEHHH---------------------- |
9 | 5vfzA | 0.15 | 0.10 | 0.66 | 0.51 | CNFpred | | IAQIKGEHLDLIERTMTVTGK-GNVTATLPLHHRVVEIAYQMPRRGHWFPGPDRGHQRRESVSGTI------KEAMIRAGVVG--------SAHCLRHWFGTALLEA-----------VDLRTVQELMRHQSLTSTEI------------------------------- |
10 | 4xqkA | 0.06 | 0.05 | 0.79 | 0.83 | DEthreader | | TVSTMDWNSN----ARE---------TIDQ-IDIKDGQMNNRFLTKDIATQVINLRVDE-RFE-A------IDKLNMPQLIVVGDRK-YLENWSKDVAKIAERQINWINK---KDPISLEFKKFVSSLQHNINSIQAEMQHITPEA-KEQ---VLYLTDTS-FTN---- |
(a) | ID1 is the number of template residues identical to query divided by number of aligned residues. |
(b) | ID2 is the number of template residues identical to query divided by query sequence length. |
(c) | Cov is equal the number of aligned template residues divided by query sequence length. |
(d) | Norm. Zscore is the normalized Z-score of the threading alignments. A Normalized Z-score >1 means a good alignment and is highlighted in bold. |
(e) | Threading program lists the threading program used to identify the template. |
(f) | Template residues identical to query sequence are highlighted in color. |
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