>PF11265 (214 residues) DHTVQADIVFVIEGTAINGAYLNDLKTNYLLPTLEYFSQGNLEDRDYVCEGTSTLYGLVV YHAADILPKSSCDCYGPYSSPQKLLMTLDKLELIGGKGESHANIAEGLATALQAFEDLQQ KREGNNIITQKHCILVCNSPPYFMPVMEASTYSGHTIDQLAAILNEQNINLSILSPRKIP AIFKLFEKAGGDLTQSQNKNYAKDPRHLVLLKGF |
Rank | PDB hit | ID1 | ID2 | Cov | Norm. Zscore | Threadingprogram | 20 40 60 80 100 120 140 160 180 200 | | | | | | | | | | | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Seq | DHTVQADIVFVIEGTAINGAYLNDLKTNYLLPTLEYFSQGNLEDRDYVCEGTSTLYGLVVYHAADILPKSSCDCYGPYSSPQKLLMTLDKLELIGGKGESHANIAEGLATALQAFEDLQQKREGNNIITQKHCILVCNSPPYFMPVMEASTYSGHTIDQLAAILNEQNINLSILSPRKIPAIFKLFEKAGGDLTQSQNKNYAKDPRHLVLLKGF | |||||||||||||||||||
1 | 4pn7A | 0.12 | 0.10 | 0.86 | 1.17 | DEthreader | NDDIPSLRTIIIDTNPRWAAPLSKAIAN-ILIFVNAHLAF------S----NSNQVAIIASHTNRA----VWLPQPIGKQFAQIEKSLLSIRMDTTSDDTTTQISGALTLALAHINKTALSLTASNAGLHARILIISVSDSSAAQ-Y-------IPTMNAVFAAAHARIAIDTLALRGSTFLEQASFITRG---TFI-R--AAEPRLQYLFGF- | |||||||||||||
2 | 4pn7A | 0.12 | 0.11 | 0.86 | 1.17 | DEthreader | NDDIPSLRTIIIDTNPRWAAPLSKAIAN-ILIFVNAHLA-F------SN---SNQVAIIASHTNRAV---WLYPQPIGKYFAQIEKSLLSSIRLMTDLTTTTQISGALTLALAHINKTALSLTASNAGLHARILIISVS--D-SS--A-A-QYIPT-MNAVFAAAHARIAIDTLALRGSATLEQASFIT-RGTFI-R---AA-EPRGLYLGF-- | |||||||||||||
3 | 3vi3B2 | 0.10 | 0.08 | 0.85 | 1.79 | HHpred | ---YPIDLYYLMDLSYSMKDDLENVKSL-GTDLMNEMRRI----------TSDFRIGFGSFVEKTVMPYPYKNVLSLTNKGEVFNELVGKQRISGNL-DSPEGGFDAIMQVAVCGSLIGW-----RN-VTRLLVFSTDAGFHFAGDGKDHYYDYPSIAHLVQKLSENNIQTFAVTEEFQPVYKELKNLIPKSAVGLSASSNVI----------- | |||||||||||||
4 | 4cn8A2 | 0.16 | 0.13 | 0.79 | 0.68 | DisCoVER | DCAGHADIAFVFDASSSINANYQLMKN-FMKDIVDRF----N-----KTGPDGTQFAVVTFADR--A--TKQFG-LKYSSKADIKGAIDKVTPSIIGQ---TAIGDGLENAREVF-PN---R-----EVQKVVILLTDGQNNG-----H--K--S-PEHESSLLRKEGVVIVAIGVGTKSELINIA--S--SEEYVFTTSSF-DL-SIMVVLA- | |||||||||||||
5 | 2iueA | 0.13 | 0.11 | 0.80 | 0.33 | MRFsearch | ----SVDLYFLMGLSGSAQGHLSNVQT-LGSDLLKALNEIS----------RSGRIGFGSIVNM-----TFQHILKLTADSSQFQRELRKQLVSGK-LATPKGQLDAVVQVAICLGEIGWR------NGTRFLVLVTDNDFHLAKYRSRGEPDYQSVVQLASKLAENNIQPIFVVPSMVKTYEKLTTFIP--------------KLTIGELS-- | |||||||||||||
6 | 6fpyA2 | 0.13 | 0.11 | 0.86 | 1.21 | SPARKS-K | ----NKNVVFVIDISGSMRGQKVKQTKEALLKILGDM-------------QPGDYFDLVLFGTRVQSWKGSLVQASE-ANLQAAQDFVRGFSLDEA-----TNLNGGLLRGIEILNQVQESLPELS-NHASILIMLTDGDP------TEGVTDRSQILKNVRNAIRGRFPLYNLGFGDFNFLEVMSMENNGRAQRIYEDHDATQQLQGFYSQVA | |||||||||||||
7 | 6to1A | 0.13 | 0.10 | 0.78 | 0.82 | MAPalign | -VTVPVDVVMVIDQSSSMGIARLKSAIASGQRFVKKML-------PKGMATEGVRIALVSYDHE------PHRLSDFTKDTAFLCQKIR--ALTPIWG---THTQGGLKMARNIMATS--------TAVDKHIILMSDGLATEQYPYYYYFPC-NAAINEAQFAKNSGYTIHTIGYDANNSLKLTA--TDENH--------------FFTA--- | |||||||||||||
8 | 5ivw3 | 0.10 | 0.09 | 0.87 | 0.56 | CEthreader | -EDELNLLVIVVDANPIWWGKQ---TLSKCIDAVMVLGN------SHLFMNRSNKLAVIASHIQESR-----FLYPKYELLTSANEVIVEEKSDIKGQHTETLLAGSLAKALCYIHRMNKEVKD-NQEMKSRILVIKAAEDSALQY--------MNFMNVIFAAQKQNILIDACVLDSSGLLQQACDITGGLYLKVPQMPSLLQYLLWVF---- | |||||||||||||
9 | 6fpyA2 | 0.15 | 0.13 | 0.84 | 1.05 | MUSTER | ----NKNVVFVIDISGSMRGQKVKQTKEALLKILGDM-------------QPGDYFDLVLFGTRVQSWKGSLVQASE-ANLQAAQDFVRGFSLDEA-----TNLNGGLLRGIEILNQVQESLPE-LSNHASILIMLTDGDPTE------GVTDRSQILKNVRNAIRGRFPLYNLGFVDFNFLEVMSMENNGRAQRIYEDHDATQ-----QLQGF | |||||||||||||
10 | 4um8B2 | 0.12 | 0.10 | 0.84 | 1.67 | HHsearch | ---YPVDLYYLMDLSASMDDDLNTIKE-LGSRLSKEMSKL----------TSNFRLGFGSFVEKPVSPTFFKHILPLTNDAERFNEIVKNQKISANI-DTPEGGFDAIMQAAEKIGW--------RNDSLHLLVFVSDADSHFGMDSKSTVLEYPTIGQLIDKLVQNNVLLIFAVTEQVHLYENYAKLIPGATVGLLQ----KDSG-------- | |||||||||||||
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References: | |
1. | Wei Zheng, Yang Li, Chengxin Zhang, Robin Pearce, S. M. Mortuza, Yang Zhang. "Deep-learning contact-map guided protein structure prediction in CASP13." Proteins: Structure, Function, and Bioinformatics, 87: 1149-1164 (2019). |